Cluster: MGYG000002898_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002898
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002898_9 | MGYG000002898_9_91 | 105295 | 108336 | - | GH2 |
| TC | MGYG000002898_9 | MGYG000002898_9_92 | 108602 | 109687 | - | 3.A.1.11.1 |
| TC | MGYG000002898_9 | MGYG000002898_9_93 | 109837 | 110607 | - | 3.A.1.11.1 |
| TC | MGYG000002898_9 | MGYG000002898_9_94 | 110607 | 111467 | - | 3.A.1.11.1 |
| TC | MGYG000002898_9 | MGYG000002898_9_95 | 111451 | 112569 | - | 3.A.1.11.1 |
| peptidase | MGYG000002898_9 | MGYG000002898_9_96 | 112945 | 114171 | + | M20.003 |
| TC | MGYG000002898_9 | MGYG000002898_9_97 | 114498 | 116273 | + | 1.B.20.1.5 |
| TC | MGYG000002898_9 | MGYG000002898_9_98 | 116363 | 116914 | + | 1.C.75.1.2 |
Gene ID: MGYG000002898_9_91
Type: CAZyme
Location: 105295 - 108336 (-)
Type: CAZyme
Location: 105295 - 108336 (-)
Gene ID: MGYG000002898_9_92
Type: TC
Location: 108602 - 109687 (-)
Type: TC
Location: 108602 - 109687 (-)
Gene ID: MGYG000002898_9_93
Type: TC
Location: 109837 - 110607 (-)
Type: TC
Location: 109837 - 110607 (-)
Gene ID: MGYG000002898_9_94
Type: TC
Location: 110607 - 111467 (-)
Type: TC
Location: 110607 - 111467 (-)
Gene ID: MGYG000002898_9_95
Type: TC
Location: 111451 - 112569 (-)
Type: TC
Location: 111451 - 112569 (-)
Gene ID: MGYG000002898_9_96
Type: peptidase
Location: 112945 - 114171 (+)
Type: peptidase
Location: 112945 - 114171 (+)
Gene ID: MGYG000002898_9_97
Type: TC
Location: 114498 - 116273 (+)
Type: TC
Location: 114498 - 116273 (+)
Gene ID: MGYG000002898_9_98
Type: TC
Location: 116363 - 116914 (+)
Type: TC
Location: 116363 - 116914 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D pittmaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.