Cluster: MGYG000002898_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002898
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002898_8 | MGYG000002898_8_32 | 32151 | 32936 | - | GT32 |
| pfam | MGYG000002898_8 | MGYG000002898_8_33 | 33263 | 34705 | + | tRNA-synt_1c | Anticodon_2 |
| TC | MGYG000002898_8 | MGYG000002898_8_34 | 35036 | 36877 | - | 3.A.1.106.2 |
| CAZyme | MGYG000002898_8 | MGYG000002898_8_35 | 36992 | 38035 | - | GT9 |
| pfam | MGYG000002898_8 | MGYG000002898_8_36 | 38077 | 38832 | + | RIO1 | Kdo |
| peptidase | MGYG000002898_8 | MGYG000002898_8_37 | 38882 | 39724 | - | C44.UPW |
| CAZyme | MGYG000002898_8 | MGYG000002898_8_38 | 40507 | 41592 | - | GH23 |
Gene ID: MGYG000002898_8_32
Type: CAZyme
Location: 32151 - 32936 (-)
Type: CAZyme
Location: 32151 - 32936 (-)
Gene ID: MGYG000002898_8_33
Type: pfam
Location: 33263 - 34705 (+)
Type: pfam
Location: 33263 - 34705 (+)
Gene ID: MGYG000002898_8_34
Type: TC
Location: 35036 - 36877 (-)
Type: TC
Location: 35036 - 36877 (-)
Gene ID: MGYG000002898_8_35
Type: CAZyme
Location: 36992 - 38035 (-)
Type: CAZyme
Location: 36992 - 38035 (-)
Gene ID: MGYG000002898_8_36
Type: pfam
Location: 38077 - 38832 (+)
Type: pfam
Location: 38077 - 38832 (+)
Gene ID: MGYG000002898_8_37
Type: peptidase
Location: 38882 - 39724 (-)
Type: peptidase
Location: 38882 - 39724 (-)
Gene ID: MGYG000002898_8_38
Type: CAZyme
Location: 40507 - 41592 (-)
Type: CAZyme
Location: 40507 - 41592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D pittmaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.