Cluster: MGYG000002898_CGC15
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002898
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002898_7 | MGYG000002898_7_91 | 90279 | 92897 | + | GT51 |
| pfam | MGYG000002898_7 | MGYG000002898_7_92 | 92955 | 93800 | + | RsmJ |
| CAZyme | MGYG000002898_7 | MGYG000002898_7_93 | 93968 | 95011 | + | GT9 |
| pfam | MGYG000002898_7 | MGYG000002898_7_94 | 95041 | 95946 | + | EamA | EamA |
| CAZyme | MGYG000002898_7 | MGYG000002898_7_95 | 95943 | 96902 | + | GT9 |
| TC | MGYG000002898_7 | MGYG000002898_7_96 | 97054 | 98163 | + | 1.B.1.3.3 |
| pfam | MGYG000002898_7 | MGYG000002898_7_97 | 98341 | 99222 | + | HSP33 |
| peptidase | MGYG000002898_7 | MGYG000002898_7_98 | 99266 | 100144 | - | S09.UNW |
| TC | MGYG000002898_7 | MGYG000002898_7_99 | 100166 | 102247 | - | 1.B.14.1.4 |
| TC | MGYG000002898_7 | MGYG000002898_7_100 | 102441 | 105521 | - | 1.B.14.1.14 |
Gene ID: MGYG000002898_7_91
Type: CAZyme
Location: 90279 - 92897 (+)
Type: CAZyme
Location: 90279 - 92897 (+)
Gene ID: MGYG000002898_7_92
Type: pfam
Location: 92955 - 93800 (+)
Type: pfam
Location: 92955 - 93800 (+)
Gene ID: MGYG000002898_7_93
Type: CAZyme
Location: 93968 - 95011 (+)
Type: CAZyme
Location: 93968 - 95011 (+)
Gene ID: MGYG000002898_7_94
Type: pfam
Location: 95041 - 95946 (+)
Type: pfam
Location: 95041 - 95946 (+)
Gene ID: MGYG000002898_7_95
Type: CAZyme
Location: 95943 - 96902 (+)
Type: CAZyme
Location: 95943 - 96902 (+)
Gene ID: MGYG000002898_7_96
Type: TC
Location: 97054 - 98163 (+)
Type: TC
Location: 97054 - 98163 (+)
Gene ID: MGYG000002898_7_97
Type: pfam
Location: 98341 - 99222 (+)
Type: pfam
Location: 98341 - 99222 (+)
Gene ID: MGYG000002898_7_98
Type: peptidase
Location: 99266 - 100144 (-)
Type: peptidase
Location: 99266 - 100144 (-)
Gene ID: MGYG000002898_7_99
Type: TC
Location: 100166 - 102247 (-)
Type: TC
Location: 100166 - 102247 (-)
Gene ID: MGYG000002898_7_100
Type: TC
Location: 102441 - 105521 (-)
Type: TC
Location: 102441 - 105521 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D pittmaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.