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Cluster: MGYG000002898_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002898_5 MGYG000002898_5_54 56012 57502 - 2.A.21.2.3
pfam MGYG000002898_5 MGYG000002898_5_55 57512 60964 - Aldedh | Pro_dh | Pro_dh-DNA_bdg | PRODH
TF MGYG000002898_5 MGYG000002898_5_56 61450 62163 - GntR
CAZyme MGYG000002898_5 MGYG000002898_5_57 62360 63865 + GH77
CAZyme MGYG000002898_5 MGYG000002898_5_58 63865 66132 + GT35
pfam MGYG000002898_5 MGYG000002898_5_59 66142 66933 + Exo_endo_phos
TC MGYG000002898_5 MGYG000002898_5_60 66944 68608 + 4.A.1.1.11
Gene ID: MGYG000002898_5_54
Type: TC
Location: 56012 - 57502 (-)
Gene ID: MGYG000002898_5_55
Type: pfam
Location: 57512 - 60964 (-)
Gene ID: MGYG000002898_5_56
Type: TF
Location: 61450 - 62163 (-)
Gene ID: MGYG000002898_5_57
Type: CAZyme
Location: 62360 - 63865 (+)
Gene ID: MGYG000002898_5_58
Type: CAZyme
Location: 63865 - 66132 (+)
Gene ID: MGYG000002898_5_59
Type: pfam
Location: 66142 - 66933 (+)
Gene ID: MGYG000002898_5_60
Type: TC
Location: 66944 - 68608 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002898_5_60 vegan > omnivore 1.04550 0.02445

🧭 Explore Read Mapping of CGC

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