Cluster: MGYG000002898_CGC12
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002898
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002898_4 | MGYG000002898_4_167 | 151744 | 152778 | + | GT9 |
| TC | MGYG000002898_4 | MGYG000002898_4_168 | 152728 | 153393 | - | 2.A.115.2.7 |
| pfam | MGYG000002898_4 | MGYG000002898_4_169 | 153603 | 155144 | + | PFL-like | YjjI-like |
| pfam | MGYG000002898_4 | MGYG000002898_4_170 | 155321 | 157036 | - | tRNA-synt_2b | HGTP_anticodon | tRNA_edit |
| TC | MGYG000002898_4 | MGYG000002898_4_171 | 157228 | 158280 | - | 3.A.1.11.1 |
| pfam | MGYG000002898_4 | MGYG000002898_4_172 | 158411 | 159703 | + | FAD_binding_2 | DAO | FAD_binding_3 | Thi4 | NAD_binding_8 |
| TC | MGYG000002898_4 | MGYG000002898_4_173 | 160040 | 161392 | + | 2.A.1.4.2 |
| pfam | MGYG000002898_4 | MGYG000002898_4_174 | 161456 | 162598 | - | Oxidored_FMN |
| pfam | MGYG000002898_4 | MGYG000002898_4_175 | 162877 | 165372 | + | Adenylate_cycl | Adenyl_cycl_N |
| TC | MGYG000002898_4 | MGYG000002898_4_176 | 165471 | 166322 | + | 9.B.1.1.6 |
| TC | MGYG000002898_4 | MGYG000002898_4_177 | 166580 | 168034 | + | 2.A.47.3.1 |
| TC | MGYG000002898_4 | MGYG000002898_4_178 | 168314 | 169414 | + | 5.A.3.4.2 |
| TC | MGYG000002898_4 | MGYG000002898_4_179 | 169445 | 171922 | + | 5.A.3.4.2 |
| pfam | MGYG000002898_4 | MGYG000002898_4_180 | 172175 | 172717 | + | CMD |
| pfam | MGYG000002898_4 | MGYG000002898_4_181 | 172949 | 173581 | - | FKBP_C | FKBP_N |
| TC | MGYG000002898_4 | MGYG000002898_4_182 | 173607 | 174476 | - | 2.A.25.1.6 |
Gene ID: MGYG000002898_4_167
Type: CAZyme
Location: 151744 - 152778 (+)
Type: CAZyme
Location: 151744 - 152778 (+)
Gene ID: MGYG000002898_4_168
Type: TC
Location: 152728 - 153393 (-)
Type: TC
Location: 152728 - 153393 (-)
Gene ID: MGYG000002898_4_169
Type: pfam
Location: 153603 - 155144 (+)
Type: pfam
Location: 153603 - 155144 (+)
Gene ID: MGYG000002898_4_170
Type: pfam
Location: 155321 - 157036 (-)
Type: pfam
Location: 155321 - 157036 (-)
Gene ID: MGYG000002898_4_171
Type: TC
Location: 157228 - 158280 (-)
Type: TC
Location: 157228 - 158280 (-)
Gene ID: MGYG000002898_4_172
Type: pfam
Location: 158411 - 159703 (+)
Type: pfam
Location: 158411 - 159703 (+)
Gene ID: MGYG000002898_4_173
Type: TC
Location: 160040 - 161392 (+)
Type: TC
Location: 160040 - 161392 (+)
Gene ID: MGYG000002898_4_174
Type: pfam
Location: 161456 - 162598 (-)
Type: pfam
Location: 161456 - 162598 (-)
Gene ID: MGYG000002898_4_175
Type: pfam
Location: 162877 - 165372 (+)
Type: pfam
Location: 162877 - 165372 (+)
Gene ID: MGYG000002898_4_176
Type: TC
Location: 165471 - 166322 (+)
Type: TC
Location: 165471 - 166322 (+)
Gene ID: MGYG000002898_4_177
Type: TC
Location: 166580 - 168034 (+)
Type: TC
Location: 166580 - 168034 (+)
Gene ID: MGYG000002898_4_178
Type: TC
Location: 168314 - 169414 (+)
Type: TC
Location: 168314 - 169414 (+)
Gene ID: MGYG000002898_4_179
Type: TC
Location: 169445 - 171922 (+)
Type: TC
Location: 169445 - 171922 (+)
Gene ID: MGYG000002898_4_180
Type: pfam
Location: 172175 - 172717 (+)
Type: pfam
Location: 172175 - 172717 (+)
Gene ID: MGYG000002898_4_181
Type: pfam
Location: 172949 - 173581 (-)
Type: pfam
Location: 172949 - 173581 (-)
Gene ID: MGYG000002898_4_182
Type: TC
Location: 173607 - 174476 (-)
Type: TC
Location: 173607 - 174476 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D pittmaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.