Cluster: MGYG000002898_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002898
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002898_1 | MGYG000002898_1_65 | 75188 | 76240 | - | GT28 |
| TC | MGYG000002898_1 | MGYG000002898_1_66 | 76241 | 77428 | - | 2.A.103.1.1 |
| pfam | MGYG000002898_1 | MGYG000002898_1_67 | 77439 | 78761 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | MGYG000002898_1 | MGYG000002898_1_68 | 78871 | 79953 | - | 9.B.146.1.6 |
Gene ID: MGYG000002898_1_65
Type: CAZyme
Location: 75188 - 76240 (-)
Type: CAZyme
Location: 75188 - 76240 (-)
Gene ID: MGYG000002898_1_66
Type: TC
Location: 76241 - 77428 (-)
Type: TC
Location: 76241 - 77428 (-)
Gene ID: MGYG000002898_1_67
Type: pfam
Location: 77439 - 78761 (-)
Type: pfam
Location: 77439 - 78761 (-)
Gene ID: MGYG000002898_1_68
Type: TC
Location: 78871 - 79953 (-)
Type: TC
Location: 78871 - 79953 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D pittmaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.