Cluster: MGYG000002897_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002897
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002897_14 | MGYG000002897_14_7 | 8014 | 9135 | - | GT28 |
| TC | MGYG000002897_14 | MGYG000002897_14_8 | 9125 | 10471 | - | 2.A.103.1.3 |
| pfam | MGYG000002897_14 | MGYG000002897_14_9 | 10474 | 11913 | - | Mur_ligase_C | Mur_ligase_M |
| TC | MGYG000002897_14 | MGYG000002897_14_10 | 11910 | 13022 | - | 9.B.146.1.6 |
Gene ID: MGYG000002897_14_7
Type: CAZyme
Location: 8014 - 9135 (-)
Type: CAZyme
Location: 8014 - 9135 (-)
Gene ID: MGYG000002897_14_8
Type: TC
Location: 9125 - 10471 (-)
Type: TC
Location: 9125 - 10471 (-)
Gene ID: MGYG000002897_14_9
Type: pfam
Location: 10474 - 11913 (-)
Type: pfam
Location: 10474 - 11913 (-)
Gene ID: MGYG000002897_14_10
Type: TC
Location: 11910 - 13022 (-)
Type: TC
Location: 11910 - 13022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.