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Cluster: MGYG000002894_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002894_6 MGYG000002894_6_32 32295 33959 - GH13_30
TC MGYG000002894_6 MGYG000002894_6_33 33978 34823 - 3.A.1.1.41
TC MGYG000002894_6 MGYG000002894_6_34 34820 35884 - 3.A.1.1.25
TC MGYG000002894_6 MGYG000002894_6_35 35896 37191 - 3.A.1.1.41
pfam MGYG000002894_6 MGYG000002894_6_36 37328 38236 - LppM
pfam MGYG000002894_6 MGYG000002894_6_37 38447 39166 + PNP_UDP_1
TC MGYG000002894_6 MGYG000002894_6_38 39163 40575 + 2.A.1.3.22
pfam MGYG000002894_6 MGYG000002894_6_39 40572 41222 + DeoC
pfam MGYG000002894_6 MGYG000002894_6_40 41222 42862 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC MGYG000002894_6 MGYG000002894_6_41 43017 44510 + 2.A.17.1.7
Gene ID: MGYG000002894_6_32
Type: CAZyme
Location: 32295 - 33959 (-)
Gene ID: MGYG000002894_6_33
Type: TC
Location: 33978 - 34823 (-)
Gene ID: MGYG000002894_6_34
Type: TC
Location: 34820 - 35884 (-)
Gene ID: MGYG000002894_6_35
Type: TC
Location: 35896 - 37191 (-)
Gene ID: MGYG000002894_6_36
Type: pfam
Location: 37328 - 38236 (-)
Gene ID: MGYG000002894_6_37
Type: pfam
Location: 38447 - 39166 (+)
Gene ID: MGYG000002894_6_38
Type: TC
Location: 39163 - 40575 (+)
Gene ID: MGYG000002894_6_39
Type: pfam
Location: 40572 - 41222 (+)
Gene ID: MGYG000002894_6_40
Type: pfam
Location: 41222 - 42862 (+)
Gene ID: MGYG000002894_6_41
Type: TC
Location: 43017 - 44510 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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