Cluster: MGYG000002894_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002894
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002894_3 | MGYG000002894_3_48 | 54449 | 55144 | + | GT2 |
| pfam | MGYG000002894_3 | MGYG000002894_3_49 | 55188 | 55553 | - | RbpA |
| pfam | MGYG000002894_3 | MGYG000002894_3_50 | 55684 | 56376 | - | TrmO_N | TrmO_C |
| TC | MGYG000002894_3 | MGYG000002894_3_51 | 56406 | 57656 | + | 2.A.1.67.1 |
| TC | MGYG000002894_3 | MGYG000002894_3_52 | 57758 | 59674 | + | 2.A.40.3.3 |
Gene ID: MGYG000002894_3_48
Type: CAZyme
Location: 54449 - 55144 (+)
Type: CAZyme
Location: 54449 - 55144 (+)
Gene ID: MGYG000002894_3_49
Type: pfam
Location: 55188 - 55553 (-)
Type: pfam
Location: 55188 - 55553 (-)
Gene ID: MGYG000002894_3_50
Type: pfam
Location: 55684 - 56376 (-)
Type: pfam
Location: 55684 - 56376 (-)
Gene ID: MGYG000002894_3_51
Type: TC
Location: 56406 - 57656 (+)
Type: TC
Location: 56406 - 57656 (+)
Gene ID: MGYG000002894_3_52
Type: TC
Location: 57758 - 59674 (+)
Type: TC
Location: 57758 - 59674 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Winkia
Species
Winkia anitrata
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.