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Cluster: MGYG000002889_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002889_1 MGYG000002889_1_28 26243 28057 - GH15
pfam MGYG000002889_1 MGYG000002889_1_29 28176 28958 + adh_short | KR | adh_short_C2
TC MGYG000002889_1 MGYG000002889_1_30 28955 29530 - 9.B.27.2.7
TC MGYG000002889_1 MGYG000002889_1_31 29740 30327 + 9.B.29.3.1
peptidase MGYG000002889_1 MGYG000002889_1_32 30550 31497 + S11.002
TC MGYG000002889_1 MGYG000002889_1_33 31642 34080 + 1.A.23.1.2
pfam MGYG000002889_1 MGYG000002889_1_34 34182 35894 - FAD_binding_4 | Lact-deh-memb
CAZyme MGYG000002889_1 MGYG000002889_1_35 36052 38349 + GH3
Gene ID: MGYG000002889_1_28
Type: CAZyme
Location: 26243 - 28057 (-)
Gene ID: MGYG000002889_1_29
Type: pfam
Location: 28176 - 28958 (+)
Gene ID: MGYG000002889_1_30
Type: TC
Location: 28955 - 29530 (-)
Gene ID: MGYG000002889_1_31
Type: TC
Location: 29740 - 30327 (+)
Gene ID: MGYG000002889_1_32
Type: peptidase
Location: 30550 - 31497 (+)
Gene ID: MGYG000002889_1_33
Type: TC
Location: 31642 - 34080 (+)
Gene ID: MGYG000002889_1_34
Type: pfam
Location: 34182 - 35894 (-)
Gene ID: MGYG000002889_1_35
Type: CAZyme
Location: 36052 - 38349 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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