Cluster: MGYG000002888_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002888
- CGC Family ID: CGCFAM_02901
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002888_16 | MGYG000002888_16_9 | 12883 | 14214 | + | CE9 |
| sulfatase | MGYG000002888_16 | MGYG000002888_16_10 | 14379 | 15155 | + | S1_9 |
| pfam | MGYG000002888_16 | MGYG000002888_16_11 | 15625 | 16542 | - | DHDPS |
| CAZyme | MGYG000002888_16 | MGYG000002888_16_12 | 16695 | 19028 | - | GH33 |
| TC | MGYG000002888_16 | MGYG000002888_16_13 | 19254 | 20846 | + | 2.A.1.12.1 |
| pfam | MGYG000002888_16 | MGYG000002888_16_14 | 20849 | 21769 | + | DUF4862 |
| NULL(UNKNOWN) | MGYG000002888_16 | MGYG000002888_16_15 | 22142 | 22420 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002888_16 | MGYG000002888_16_16 | 22611 | 24209 | - | 2.A.21.3.20 |
| NULL(UNKNOWN) | MGYG000002888_16 | MGYG000002888_16_17 | 24903 | 25241 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002888_16 | MGYG000002888_16_18 | 25927 | 26640 | - | 1.C.82.1.1 |
Gene ID: MGYG000002888_16_9
Type: CAZyme
Location: 12883 - 14214 (+)
Type: CAZyme
Location: 12883 - 14214 (+)
Gene ID: MGYG000002888_16_10
Type: sulfatase
Location: 14379 - 15155 (+)
Type: sulfatase
Location: 14379 - 15155 (+)
Gene ID: MGYG000002888_16_11
Type: pfam
Location: 15625 - 16542 (-)
Type: pfam
Location: 15625 - 16542 (-)
Gene ID: MGYG000002888_16_12
Type: CAZyme
Location: 16695 - 19028 (-)
Type: CAZyme
Location: 16695 - 19028 (-)
Gene ID: MGYG000002888_16_13
Type: TC
Location: 19254 - 20846 (+)
Type: TC
Location: 19254 - 20846 (+)
Gene ID: MGYG000002888_16_14
Type: pfam
Location: 20849 - 21769 (+)
Type: pfam
Location: 20849 - 21769 (+)
Gene ID: MGYG000002888_16_15
Type:
Location: 22142 - 22420 (-)
Type:
Location: 22142 - 22420 (-)
Gene ID: MGYG000002888_16_16
Type: TC
Location: 22611 - 24209 (-)
Type: TC
Location: 22611 - 24209 (-)
Gene ID: MGYG000002888_16_17
Type:
Location: 24903 - 25241 (-)
Type:
Location: 24903 - 25241 (-)
Gene ID: MGYG000002888_16_18
Type: TC
Location: 25927 - 26640 (-)
Type: TC
Location: 25927 - 26640 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.