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Cluster: MGYG000002878_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002878_4 MGYG000002878_4_10 11404 12342 + 2.A.7.3.57
pfam MGYG000002878_4 MGYG000002878_4_11 12377 12715 - HIRAN
CAZyme MGYG000002878_4 MGYG000002878_4_12 12823 13932 + GT27
TC MGYG000002878_4 MGYG000002878_4_13 13929 15287 + 2.A.38.1.1
TF MGYG000002878_4 MGYG000002878_4_14 15221 19255 - HTH_AraC
TC MGYG000002878_4 MGYG000002878_4_15 19488 22463 + 1.B.14.6.1
TC MGYG000002878_4 MGYG000002878_4_16 22484 24109 + 8.A.46.1.1
pfam MGYG000002878_4 MGYG000002878_4_17 24128 25891 + SusE | DUF5111 | DUF5114
CAZyme MGYG000002878_4 MGYG000002878_4_18 25953 27047 + GH53
CAZyme MGYG000002878_4 MGYG000002878_4_19 27055 29550 + GH2
CAZyme MGYG000002878_4 MGYG000002878_4_20 29590 30906 - GH29
pfam MGYG000002878_4 MGYG000002878_4_21 31121 32494 + OEP | OEP
pfam MGYG000002878_4 MGYG000002878_4_22 32502 33758 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC MGYG000002878_4 MGYG000002878_4_23 33789 34469 + 3.A.1.122.2
Gene ID: MGYG000002878_4_10
Type: TC
Location: 11404 - 12342 (+)
Gene ID: MGYG000002878_4_11
Type: pfam
Location: 12377 - 12715 (-)
Gene ID: MGYG000002878_4_12
Type: CAZyme
Location: 12823 - 13932 (+)
Gene ID: MGYG000002878_4_13
Type: TC
Location: 13929 - 15287 (+)
Gene ID: MGYG000002878_4_14
Type: TF
Location: 15221 - 19255 (-)
Gene ID: MGYG000002878_4_15
Type: TC
Location: 19488 - 22463 (+)
Gene ID: MGYG000002878_4_16
Type: TC
Location: 22484 - 24109 (+)
Gene ID: MGYG000002878_4_17
Type: pfam
Location: 24128 - 25891 (+)
Gene ID: MGYG000002878_4_18
Type: CAZyme
Location: 25953 - 27047 (+)
Gene ID: MGYG000002878_4_19
Type: CAZyme
Location: 27055 - 29550 (+)
Gene ID: MGYG000002878_4_20
Type: CAZyme
Location: 29590 - 30906 (-)
Gene ID: MGYG000002878_4_21
Type: pfam
Location: 31121 - 32494 (+)
Gene ID: MGYG000002878_4_22
Type: pfam
Location: 32502 - 33758 (+)
Gene ID: MGYG000002878_4_23
Type: TC
Location: 33789 - 34469 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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