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Cluster: MGYG000002878_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002878_26 MGYG000002878_26_2 3087 6242 + 1.B.14.6.1
pfam MGYG000002878_26 MGYG000002878_26_3 6273 8249 + SusD_RagB | SusD-like_3
CAZyme MGYG000002878_26 MGYG000002878_26_4 8261 10555 + GH92
pfam MGYG000002878_26 MGYG000002878_26_5 10566 10952 + Glyco_hydro_92N
CAZyme MGYG000002878_26 MGYG000002878_26_6 10981 12882 + GH92
pfam MGYG000002878_26 MGYG000002878_26_7 12916 13713 + BSP
CAZyme MGYG000002878_26 MGYG000002878_26_8 13723 16059 + GH92
peptidase MGYG000002878_26 MGYG000002878_26_9 16066 17682 + C02.UPA
NULL(UNKNOWN) MGYG000002878_26 MGYG000002878_26_10 17752 19350 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000002878_26 MGYG000002878_26_11 19481 22420 + GH127 | GH43_34
Gene ID: MGYG000002878_26_2
Type: TC
Location: 3087 - 6242 (+)
Gene ID: MGYG000002878_26_3
Type: pfam
Location: 6273 - 8249 (+)
Gene ID: MGYG000002878_26_4
Type: CAZyme
Location: 8261 - 10555 (+)
Gene ID: MGYG000002878_26_5
Type: pfam
Location: 10566 - 10952 (+)
Gene ID: MGYG000002878_26_6
Type: CAZyme
Location: 10981 - 12882 (+)
Gene ID: MGYG000002878_26_7
Type: pfam
Location: 12916 - 13713 (+)
Gene ID: MGYG000002878_26_8
Type: CAZyme
Location: 13723 - 16059 (+)
Gene ID: MGYG000002878_26_9
Type: peptidase
Location: 16066 - 17682 (+)
Gene ID: MGYG000002878_26_10
Type:
Location: 17752 - 19350 (+)
Gene ID: MGYG000002878_26_11
Type: CAZyme
Location: 19481 - 22420 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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