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Cluster: MGYG000002878_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002878_24 MGYG000002878_24_21 19708 20556 - 2.A.5.5.5
TC MGYG000002878_24 MGYG000002878_24_22 20576 22570 - 2.A.67.4.2
TF MGYG000002878_24 MGYG000002878_24_23 22733 23314 + GerE
STP MGYG000002878_24 MGYG000002878_24_24 23423 24373 + FecR
TC MGYG000002878_24 MGYG000002878_24_25 24434 27730 + 1.B.14.6.1
pfam MGYG000002878_24 MGYG000002878_24_26 27765 29678 + SusD_RagB | SusD-like_3
pfam MGYG000002878_24 MGYG000002878_24_27 29730 31064 + F5_F8_type_C | BT_3987-like_N
CAZyme MGYG000002878_24 MGYG000002878_24_28 31066 32706 + GH27
Gene ID: MGYG000002878_24_21
Type: TC
Location: 19708 - 20556 (-)
Gene ID: MGYG000002878_24_22
Type: TC
Location: 20576 - 22570 (-)
Gene ID: MGYG000002878_24_23
Type: TF
Location: 22733 - 23314 (+)
Gene ID: MGYG000002878_24_24
Type: STP
Location: 23423 - 24373 (+)
Gene ID: MGYG000002878_24_25
Type: TC
Location: 24434 - 27730 (+)
Gene ID: MGYG000002878_24_26
Type: pfam
Location: 27765 - 29678 (+)
Gene ID: MGYG000002878_24_27
Type: pfam
Location: 29730 - 31064 (+)
Gene ID: MGYG000002878_24_28
Type: CAZyme
Location: 31066 - 32706 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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