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Cluster: MGYG000002869_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002869_2 MGYG000002869_2_11 8508 8951 + 4.A.6.1.16
pfam MGYG000002869_2 MGYG000002869_2_12 8951 9232 + YajC
TC MGYG000002869_2 MGYG000002869_2_13 9269 9751 + 4.A.6.1.4
TC MGYG000002869_2 MGYG000002869_2_14 9842 10642 + 4.A.6.1.4
TC MGYG000002869_2 MGYG000002869_2_15 10632 11714 + 4.A.6.1.4
TF MGYG000002869_2 MGYG000002869_2_16 11899 12630 + GntR
STP MGYG000002869_2 MGYG000002869_2_17 12745 13911 + SIS | SIS
CAZyme MGYG000002869_2 MGYG000002869_2_18 14030 15199 + CE9
Gene ID: MGYG000002869_2_11
Type: TC
Location: 8508 - 8951 (+)
Gene ID: MGYG000002869_2_12
Type: pfam
Location: 8951 - 9232 (+)
Gene ID: MGYG000002869_2_13
Type: TC
Location: 9269 - 9751 (+)
Gene ID: MGYG000002869_2_14
Type: TC
Location: 9842 - 10642 (+)
Gene ID: MGYG000002869_2_15
Type: TC
Location: 10632 - 11714 (+)
Gene ID: MGYG000002869_2_16
Type: TF
Location: 11899 - 12630 (+)
Gene ID: MGYG000002869_2_17
Type: STP
Location: 12745 - 13911 (+)
Gene ID: MGYG000002869_2_18
Type: CAZyme
Location: 14030 - 15199 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002869_2_12 vegan > omnivore 1.03281 0.00863

🧭 Explore Read Mapping of CGC

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