Cluster: MGYG000002865_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002865
- CGC Family ID: CGCFAM_00008
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002865_10 | MGYG000002865_10_38 | 41046 | 41813 | - | 3.A.1.103.1 |
| TC | MGYG000002865_10 | MGYG000002865_10_39 | 41825 | 42670 | - | 3.A.1.103.6 |
| CAZyme | MGYG000002865_10 | MGYG000002865_10_40 | 42831 | 43802 | + | GT81 |
| CAZyme | MGYG000002865_10 | MGYG000002865_10_41 | 43808 | 44134 | + | GT2 |
| TC | MGYG000002865_10 | MGYG000002865_10_42 | 44240 | 44776 | + | 4.D.2.1.9 |
| TC | MGYG000002865_10 | MGYG000002865_10_43 | 44760 | 47171 | + | 9.B.144.1.5 |
Gene ID: MGYG000002865_10_38
Type: TC
Location: 41046 - 41813 (-)
Type: TC
Location: 41046 - 41813 (-)
Gene ID: MGYG000002865_10_39
Type: TC
Location: 41825 - 42670 (-)
Type: TC
Location: 41825 - 42670 (-)
Gene ID: MGYG000002865_10_40
Type: CAZyme
Location: 42831 - 43802 (+)
Type: CAZyme
Location: 42831 - 43802 (+)
Gene ID: MGYG000002865_10_41
Type: CAZyme
Location: 43808 - 44134 (+)
Type: CAZyme
Location: 43808 - 44134 (+)
Gene ID: MGYG000002865_10_42
Type: TC
Location: 44240 - 44776 (+)
Type: TC
Location: 44240 - 44776 (+)
Gene ID: MGYG000002865_10_43
Type: TC
Location: 44760 - 47171 (+)
Type: TC
Location: 44760 - 47171 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900545745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.