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Cluster: MGYG000002864_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002864_20 MGYG000002864_20_4 2619 2957 - 4.A.3.1.2
TF MGYG000002864_20 MGYG000002864_20_5 3172 4176 - LacI
TC MGYG000002864_20 MGYG000002864_20_6 4534 6309 + 4.A.3.1.1
CAZyme MGYG000002864_20 MGYG000002864_20_7 6376 7815 + GH1
TF MGYG000002864_20 MGYG000002864_20_8 8077 9114 - LacI
CAZyme MGYG000002864_20 MGYG000002864_20_9 9456 10898 + GH1
TC MGYG000002864_20 MGYG000002864_20_10 11075 12835 + 4.A.3.1.1
TF MGYG000002864_20 MGYG000002864_20_11 13169 14179 - LacI
TC MGYG000002864_20 MGYG000002864_20_12 14455 16233 + 4.A.3.1.1
CAZyme MGYG000002864_20 MGYG000002864_20_13 16309 17730 + GH1
Gene ID: MGYG000002864_20_4
Type: TC
Location: 2619 - 2957 (-)
Gene ID: MGYG000002864_20_5
Type: TF
Location: 3172 - 4176 (-)
Gene ID: MGYG000002864_20_6
Type: TC
Location: 4534 - 6309 (+)
Gene ID: MGYG000002864_20_7
Type: CAZyme
Location: 6376 - 7815 (+)
Gene ID: MGYG000002864_20_8
Type: TF
Location: 8077 - 9114 (-)
Gene ID: MGYG000002864_20_9
Type: CAZyme
Location: 9456 - 10898 (+)
Gene ID: MGYG000002864_20_10
Type: TC
Location: 11075 - 12835 (+)
Gene ID: MGYG000002864_20_11
Type: TF
Location: 13169 - 14179 (-)
Gene ID: MGYG000002864_20_12
Type: TC
Location: 14455 - 16233 (+)
Gene ID: MGYG000002864_20_13
Type: CAZyme
Location: 16309 - 17730 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002864_20_8 vegetarian > omnivore 1.10575 0.01867

🧭 Explore Read Mapping of CGC

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