Cluster: MGYG000002861_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002861
- CGC Family ID: CGCFAM_07436
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002861_23 | MGYG000002861_23_3 | 1223 | 2236 | + | GH177 |
| TF | MGYG000002861_23 | MGYG000002861_23_4 | 2508 | 3434 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000002861_23 | MGYG000002861_23_5 | 3601 | 4731 | + | GH179 |
| pfam | MGYG000002861_23 | MGYG000002861_23_6 | 4777 | 5724 | + | AP_endonuc_2 |
| TC | MGYG000002861_23 | MGYG000002861_23_7 | 5816 | 7219 | + | 2.A.2.3.3 |
| TC | MGYG000002861_23 | MGYG000002861_23_8 | 8343 | 8945 | + | 2.A.115.2.14 |
Gene ID: MGYG000002861_23_3
Type: CAZyme
Location: 1223 - 2236 (+)
Type: CAZyme
Location: 1223 - 2236 (+)
Gene ID: MGYG000002861_23_4
Type: TF
Location: 2508 - 3434 (-)
Type: TF
Location: 2508 - 3434 (-)
Gene ID: MGYG000002861_23_5
Type: CAZyme
Location: 3601 - 4731 (+)
Type: CAZyme
Location: 3601 - 4731 (+)
Gene ID: MGYG000002861_23_6
Type: pfam
Location: 4777 - 5724 (+)
Type: pfam
Location: 4777 - 5724 (+)
Gene ID: MGYG000002861_23_7
Type: TC
Location: 5816 - 7219 (+)
Type: TC
Location: 5816 - 7219 (+)
Gene ID: MGYG000002861_23_8
Type: TC
Location: 8343 - 8945 (+)
Type: TC
Location: 8343 - 8945 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900539295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.