Cluster: MGYG000002861_CGC13
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002861
- CGC Family ID: CGCFAM_01931
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002861_13 | MGYG000002861_13_33 | 37050 | 37781 | + | GT26 |
| pfam | MGYG000002861_13 | MGYG000002861_13_34 | 37796 | 38449 | + | PS_Dcarbxylase |
| pfam | MGYG000002861_13 | MGYG000002861_13_35 | 38446 | 39120 | + | CDP-OH_P_transf |
| CAZyme | MGYG000002861_13 | MGYG000002861_13_36 | 39141 | 40391 | + | GT2 |
| pfam | MGYG000002861_13 | MGYG000002861_13_37 | 40402 | 41163 | + | SurE |
| pfam | MGYG000002861_13 | MGYG000002861_13_38 | 41156 | 41548 | + | dCMP_cyt_deam_1 | dCMP_cyt_deam_2 |
| TC | MGYG000002861_13 | MGYG000002861_13_39 | 41914 | 43299 | + | 2.A.25.1.4 |
| STP | MGYG000002861_13 | MGYG000002861_13_40 | 43801 | 44304 | + | Nitroreductase | Nitroreductase |
| TC | MGYG000002861_13 | MGYG000002861_13_41 | 44390 | 45085 | + | 2.A.64.2.1 |
| TC | MGYG000002861_13 | MGYG000002861_13_42 | 45272 | 48706 | + | 3.B.1.1.1 |
| pfam | MGYG000002861_13 | MGYG000002861_13_43 | 48780 | 49451 | + | Fer2 | Fer2_4 |
| TC | MGYG000002861_13 | MGYG000002861_13_44 | 49461 | 51071 | + | 3.D.10.1.2 |
| TC | MGYG000002861_13 | MGYG000002861_13_45 | 51078 | 52283 | - | 2.A.1.2.20 |
| TC | MGYG000002861_13 | MGYG000002861_13_46 | 52429 | 53361 | + | 3.A.1.5.2 |
| TC | MGYG000002861_13 | MGYG000002861_13_47 | 53364 | 54269 | + | 3.A.1.5.2 |
| TC | MGYG000002861_13 | MGYG000002861_13_48 | 54266 | 55261 | + | 3.A.1.5.2 |
| TC | MGYG000002861_13 | MGYG000002861_13_49 | 55248 | 56216 | + | 3.A.1.5.41 |
| TC | MGYG000002861_13 | MGYG000002861_13_50 | 56216 | 57805 | + | 3.A.1.5.2 |
Gene ID: MGYG000002861_13_33
Type: CAZyme
Location: 37050 - 37781 (+)
Type: CAZyme
Location: 37050 - 37781 (+)
Gene ID: MGYG000002861_13_34
Type: pfam
Location: 37796 - 38449 (+)
Type: pfam
Location: 37796 - 38449 (+)
Gene ID: MGYG000002861_13_35
Type: pfam
Location: 38446 - 39120 (+)
Type: pfam
Location: 38446 - 39120 (+)
Gene ID: MGYG000002861_13_36
Type: CAZyme
Location: 39141 - 40391 (+)
Type: CAZyme
Location: 39141 - 40391 (+)
Gene ID: MGYG000002861_13_37
Type: pfam
Location: 40402 - 41163 (+)
Type: pfam
Location: 40402 - 41163 (+)
Gene ID: MGYG000002861_13_38
Type: pfam
Location: 41156 - 41548 (+)
Type: pfam
Location: 41156 - 41548 (+)
Gene ID: MGYG000002861_13_39
Type: TC
Location: 41914 - 43299 (+)
Type: TC
Location: 41914 - 43299 (+)
Gene ID: MGYG000002861_13_40
Type: STP
Location: 43801 - 44304 (+)
Type: STP
Location: 43801 - 44304 (+)
Gene ID: MGYG000002861_13_41
Type: TC
Location: 44390 - 45085 (+)
Type: TC
Location: 44390 - 45085 (+)
Gene ID: MGYG000002861_13_42
Type: TC
Location: 45272 - 48706 (+)
Type: TC
Location: 45272 - 48706 (+)
Gene ID: MGYG000002861_13_43
Type: pfam
Location: 48780 - 49451 (+)
Type: pfam
Location: 48780 - 49451 (+)
Gene ID: MGYG000002861_13_44
Type: TC
Location: 49461 - 51071 (+)
Type: TC
Location: 49461 - 51071 (+)
Gene ID: MGYG000002861_13_45
Type: TC
Location: 51078 - 52283 (-)
Type: TC
Location: 51078 - 52283 (-)
Gene ID: MGYG000002861_13_46
Type: TC
Location: 52429 - 53361 (+)
Type: TC
Location: 52429 - 53361 (+)
Gene ID: MGYG000002861_13_47
Type: TC
Location: 53364 - 54269 (+)
Type: TC
Location: 53364 - 54269 (+)
Gene ID: MGYG000002861_13_48
Type: TC
Location: 54266 - 55261 (+)
Type: TC
Location: 54266 - 55261 (+)
Gene ID: MGYG000002861_13_49
Type: TC
Location: 55248 - 56216 (+)
Type: TC
Location: 55248 - 56216 (+)
Gene ID: MGYG000002861_13_50
Type: TC
Location: 56216 - 57805 (+)
Type: TC
Location: 56216 - 57805 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900539295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.