Cluster: MGYG000002860_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002860
- CGC Family ID: CGCFAM_04435
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002860_5 | MGYG000002860_5_6 | 5971 | 6321 | + | 2.A.7.33.5 |
| STP | MGYG000002860_5 | MGYG000002860_5_7 | 6318 | 7454 | + | Aminotran_1_2 |
| CAZyme | MGYG000002860_5 | MGYG000002860_5_8 | 7502 | 10519 | + | GH73 |
| NULL(UNKNOWN) | MGYG000002860_5 | MGYG000002860_5_9 | 10563 | 12029 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002860_5 | MGYG000002860_5_10 | 12069 | 14447 | + | GT2 | GT2 |
Gene ID: MGYG000002860_5_6
Type: TC
Location: 5971 - 6321 (+)
Type: TC
Location: 5971 - 6321 (+)
Gene ID: MGYG000002860_5_7
Type: STP
Location: 6318 - 7454 (+)
Type: STP
Location: 6318 - 7454 (+)
Gene ID: MGYG000002860_5_8
Type: CAZyme
Location: 7502 - 10519 (+)
Type: CAZyme
Location: 7502 - 10519 (+)
Gene ID: MGYG000002860_5_9
Type:
Location: 10563 - 12029 (+)
Type:
Location: 10563 - 12029 (+)
Gene ID: MGYG000002860_5_10
Type: CAZyme
Location: 12069 - 14447 (+)
Type: CAZyme
Location: 12069 - 14447 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900544205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.