Cluster: MGYG000002859_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002859
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002859_4 | MGYG000002859_4_71 | 78692 | 80092 | + | GH1 |
| TC | MGYG000002859_4 | MGYG000002859_4_72 | 80213 | 81556 | + | 4.A.3.2.9 |
| TC | MGYG000002859_4 | MGYG000002859_4_73 | 81717 | 82019 | + | 4.A.3.2.9 |
| TC | MGYG000002859_4 | MGYG000002859_4_74 | 82029 | 82361 | + | 4.A.3.2.3 |
| pfam | MGYG000002859_4 | MGYG000002859_4_75 | 82603 | 83556 | + | ROK |
| pfam | MGYG000002859_4 | MGYG000002859_4_76 | 83722 | 84645 | + | DHH | DHHA2 |
| TC | MGYG000002859_4 | MGYG000002859_4_77 | 84913 | 86271 | + | 2.A.33.1.1 |
Gene ID: MGYG000002859_4_71
Type: CAZyme
Location: 78692 - 80092 (+)
Type: CAZyme
Location: 78692 - 80092 (+)
Gene ID: MGYG000002859_4_72
Type: TC
Location: 80213 - 81556 (+)
Type: TC
Location: 80213 - 81556 (+)
Gene ID: MGYG000002859_4_73
Type: TC
Location: 81717 - 82019 (+)
Type: TC
Location: 81717 - 82019 (+)
Gene ID: MGYG000002859_4_74
Type: TC
Location: 82029 - 82361 (+)
Type: TC
Location: 82029 - 82361 (+)
Gene ID: MGYG000002859_4_75
Type: pfam
Location: 82603 - 83556 (+)
Type: pfam
Location: 82603 - 83556 (+)
Gene ID: MGYG000002859_4_76
Type: pfam
Location: 83722 - 84645 (+)
Type: pfam
Location: 83722 - 84645 (+)
Gene ID: MGYG000002859_4_77
Type: TC
Location: 84913 - 86271 (+)
Type: TC
Location: 84913 - 86271 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.