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Cluster: MGYG000002859_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002859_24 MGYG000002859_24_12 12924 14249 + GH4
TC MGYG000002859_24 MGYG000002859_24_13 14332 15894 + 4.A.1.1.3
TC MGYG000002859_24 MGYG000002859_24_14 16125 17378 - 2.A.1.2.25
NULL(UNKNOWN) MGYG000002859_24 MGYG000002859_24_15 17640 18509 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000002859_24 MGYG000002859_24_16 18589 19482 + Aldose_epim
TC MGYG000002859_24 MGYG000002859_24_17 19809 20735 + 3.A.1.3.20
TC MGYG000002859_24 MGYG000002859_24_18 20745 21893 + 3.A.1.3.20
TC MGYG000002859_24 MGYG000002859_24_19 21916 22701 + 3.A.1.3.20
Gene ID: MGYG000002859_24_12
Type: CAZyme
Location: 12924 - 14249 (+)
Gene ID: MGYG000002859_24_13
Type: TC
Location: 14332 - 15894 (+)
Gene ID: MGYG000002859_24_14
Type: TC
Location: 16125 - 17378 (-)
Gene ID: MGYG000002859_24_15
Type:
Location: 17640 - 18509 (+)
Gene ID: MGYG000002859_24_16
Type: pfam
Location: 18589 - 19482 (+)
Gene ID: MGYG000002859_24_17
Type: TC
Location: 19809 - 20735 (+)
Gene ID: MGYG000002859_24_18
Type: TC
Location: 20745 - 21893 (+)
Gene ID: MGYG000002859_24_19
Type: TC
Location: 21916 - 22701 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002859_24_19 vegetarian > vegan 1.02549 0.00566

🧭 Explore Read Mapping of CGC

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