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Cluster: MGYG000002852_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002852_19 MGYG000002852_19_9 8869 9312 + 4.A.6.1.16
pfam MGYG000002852_19 MGYG000002852_19_10 9312 9593 + YajC
TC MGYG000002852_19 MGYG000002852_19_11 9630 10112 + 4.A.6.1.4
TC MGYG000002852_19 MGYG000002852_19_12 10203 11003 + 4.A.6.1.4
TC MGYG000002852_19 MGYG000002852_19_13 10993 12075 + 4.A.6.1.4
TF MGYG000002852_19 MGYG000002852_19_14 12261 12992 + GntR
STP MGYG000002852_19 MGYG000002852_19_15 13107 14273 + SIS | SIS
CAZyme MGYG000002852_19 MGYG000002852_19_16 14391 15560 + CE9
Gene ID: MGYG000002852_19_9
Type: TC
Location: 8869 - 9312 (+)
Gene ID: MGYG000002852_19_10
Type: pfam
Location: 9312 - 9593 (+)
Gene ID: MGYG000002852_19_11
Type: TC
Location: 9630 - 10112 (+)
Gene ID: MGYG000002852_19_12
Type: TC
Location: 10203 - 11003 (+)
Gene ID: MGYG000002852_19_13
Type: TC
Location: 10993 - 12075 (+)
Gene ID: MGYG000002852_19_14
Type: TF
Location: 12261 - 12992 (+)
Gene ID: MGYG000002852_19_15
Type: STP
Location: 13107 - 14273 (+)
Gene ID: MGYG000002852_19_16
Type: CAZyme
Location: 14391 - 15560 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002852_19_9 vegan > omnivore 1.04734 0.00455
MGYG000002852_19_10 vegan > omnivore 1.12365 0.00455

🧭 Explore Read Mapping of CGC

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