Cluster: MGYG000002851_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002851
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002851_49 | MGYG000002851_49_3 | 2517 | 4934 | - | 4.A.1.1.8 |
| TF | MGYG000002851_49 | MGYG000002851_49_4 | 5197 | 5916 | + | GntR |
| TC | MGYG000002851_49 | MGYG000002851_49_5 | 6223 | 7539 | + | 3.A.1.1.45 |
| TC | MGYG000002851_49 | MGYG000002851_49_6 | 7627 | 8481 | + | 3.A.1.1.45 |
| TC | MGYG000002851_49 | MGYG000002851_49_7 | 8481 | 9320 | + | 3.A.1.1.45 |
| TC | MGYG000002851_49 | MGYG000002851_49_8 | 9389 | 10588 | + | 3.A.1.1.22 |
| CAZyme | MGYG000002851_49 | MGYG000002851_49_9 | 11044 | 13176 | - | GT35 |
Gene ID: MGYG000002851_49_3
Type: TC
Location: 2517 - 4934 (-)
Type: TC
Location: 2517 - 4934 (-)
Gene ID: MGYG000002851_49_4
Type: TF
Location: 5197 - 5916 (+)
Type: TF
Location: 5197 - 5916 (+)
Gene ID: MGYG000002851_49_5
Type: TC
Location: 6223 - 7539 (+)
Type: TC
Location: 6223 - 7539 (+)
Gene ID: MGYG000002851_49_6
Type: TC
Location: 7627 - 8481 (+)
Type: TC
Location: 7627 - 8481 (+)
Gene ID: MGYG000002851_49_7
Type: TC
Location: 8481 - 9320 (+)
Type: TC
Location: 8481 - 9320 (+)
Gene ID: MGYG000002851_49_8
Type: TC
Location: 9389 - 10588 (+)
Type: TC
Location: 9389 - 10588 (+)
Gene ID: MGYG000002851_49_9
Type: CAZyme
Location: 11044 - 13176 (-)
Type: CAZyme
Location: 11044 - 13176 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900549655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.