Cluster: MGYG000002850_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002850
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002850_13 | MGYG000002850_13_20 | 15032 | 16051 | + | GH109 |
| pfam | MGYG000002850_13 | MGYG000002850_13_21 | 16203 | 17069 | + | AP_endonuc_2 |
| TC | MGYG000002850_13 | MGYG000002850_13_22 | 17217 | 18077 | + | 3.A.1.3.15 |
| TC | MGYG000002850_13 | MGYG000002850_13_23 | 18194 | 19555 | + | 3.A.1.3.16 |
| TC | MGYG000002850_13 | MGYG000002850_13_24 | 19568 | 20320 | + | 3.A.1.3.20 |
Gene ID: MGYG000002850_13_20
Type: CAZyme
Location: 15032 - 16051 (+)
Type: CAZyme
Location: 15032 - 16051 (+)
Gene ID: MGYG000002850_13_21
Type: pfam
Location: 16203 - 17069 (+)
Type: pfam
Location: 16203 - 17069 (+)
Gene ID: MGYG000002850_13_22
Type: TC
Location: 17217 - 18077 (+)
Type: TC
Location: 17217 - 18077 (+)
Gene ID: MGYG000002850_13_23
Type: TC
Location: 18194 - 19555 (+)
Type: TC
Location: 18194 - 19555 (+)
Gene ID: MGYG000002850_13_24
Type: TC
Location: 19568 - 20320 (+)
Type: TC
Location: 19568 - 20320 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900544465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.