Cluster: MGYG000002845_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002845
- CGC Family ID: CGCFAM_10576
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002845_9 | MGYG000002845_9_1 | 2 | 1555 | - | 3.D.1.5.1 |
| TF | MGYG000002845_9 | MGYG000002845_9_2 | 1883 | 2764 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000002845_9 | MGYG000002845_9_3 | 2879 | 4960 | + | GH31_1 |
| TF | MGYG000002845_9 | MGYG000002845_9_4 | 5028 | 5912 | + | HTH_AraC |
| pfam | MGYG000002845_9 | MGYG000002845_9_5 | 5930 | 6601 | - | ABC2_membrane_5 |
| TC | MGYG000002845_9 | MGYG000002845_9_6 | 6598 | 7449 | - | 3.A.1.149.1 |
Gene ID: MGYG000002845_9_1
Type: TC
Location: 2 - 1555 (-)
Type: TC
Location: 2 - 1555 (-)
Gene ID: MGYG000002845_9_2
Type: TF
Location: 1883 - 2764 (-)
Type: TF
Location: 1883 - 2764 (-)
Gene ID: MGYG000002845_9_3
Type: CAZyme
Location: 2879 - 4960 (+)
Type: CAZyme
Location: 2879 - 4960 (+)
Gene ID: MGYG000002845_9_4
Type: TF
Location: 5028 - 5912 (+)
Type: TF
Location: 5028 - 5912 (+)
Gene ID: MGYG000002845_9_5
Type: pfam
Location: 5930 - 6601 (-)
Type: pfam
Location: 5930 - 6601 (-)
Gene ID: MGYG000002845_9_6
Type: TC
Location: 6598 - 7449 (-)
Type: TC
Location: 6598 - 7449 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.