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Cluster: MGYG000002845_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002845_3 MGYG000002845_3_54 67408 68313 + GT2
CAZyme MGYG000002845_3 MGYG000002845_3_55 68300 69199 + GT2
CAZyme MGYG000002845_3 MGYG000002845_3_56 69220 70125 + GT2
pfam MGYG000002845_3 MGYG000002845_3_57 70178 70888 + IspD | NTP_transf_3
pfam MGYG000002845_3 MGYG000002845_3_58 70891 71913 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme MGYG000002845_3 MGYG000002845_3_59 71945 72964 + GT2
pfam MGYG000002845_3 MGYG000002845_3_60 72981 73853 + LicD
CAZyme MGYG000002845_3 MGYG000002845_3_61 73878 74882 + GT8
CAZyme MGYG000002845_3 MGYG000002845_3_62 74891 75697 + GT2
CAZyme MGYG000002845_3 MGYG000002845_3_63 75711 76403 + GT2
pfam MGYG000002845_3 MGYG000002845_3_64 76414 76785 + DUF2304
pfam MGYG000002845_3 MGYG000002845_3_65 76730 78220 + DUF2142
CAZyme MGYG000002845_3 MGYG000002845_3_66 78233 79978 + GT2
CAZyme MGYG000002845_3 MGYG000002845_3_67 79989 82169 + GT4
CAZyme MGYG000002845_3 MGYG000002845_3_68 82189 83661 + GT4
TC MGYG000002845_3 MGYG000002845_3_69 83769 84545 + 3.A.1.103.6
TC MGYG000002845_3 MGYG000002845_3_70 84555 85292 + 3.A.1.103.1
NULL(UNKNOWN) MGYG000002845_3 MGYG000002845_3_71 85309 85908 + NULL(UNKNOWN)
[View Structural Homologs]
TF MGYG000002845_3 MGYG000002845_3_72 85929 87110 + MerR
CAZyme MGYG000002845_3 MGYG000002845_3_73 87230 88429 + GT2
TF MGYG000002845_3 MGYG000002845_3_74 88545 89600 + LacI
TC MGYG000002845_3 MGYG000002845_3_75 89719 91215 + 3.A.1.2.19
TC MGYG000002845_3 MGYG000002845_3_76 91220 92170 + 3.A.1.2.13
Gene ID: MGYG000002845_3_54
Type: CAZyme
Location: 67408 - 68313 (+)
Gene ID: MGYG000002845_3_55
Type: CAZyme
Location: 68300 - 69199 (+)
Gene ID: MGYG000002845_3_56
Type: CAZyme
Location: 69220 - 70125 (+)
Gene ID: MGYG000002845_3_57
Type: pfam
Location: 70178 - 70888 (+)
Gene ID: MGYG000002845_3_58
Type: pfam
Location: 70891 - 71913 (+)
Gene ID: MGYG000002845_3_59
Type: CAZyme
Location: 71945 - 72964 (+)
Gene ID: MGYG000002845_3_60
Type: pfam
Location: 72981 - 73853 (+)
Gene ID: MGYG000002845_3_61
Type: CAZyme
Location: 73878 - 74882 (+)
Gene ID: MGYG000002845_3_62
Type: CAZyme
Location: 74891 - 75697 (+)
Gene ID: MGYG000002845_3_63
Type: CAZyme
Location: 75711 - 76403 (+)
Gene ID: MGYG000002845_3_64
Type: pfam
Location: 76414 - 76785 (+)
Gene ID: MGYG000002845_3_65
Type: pfam
Location: 76730 - 78220 (+)
Gene ID: MGYG000002845_3_66
Type: CAZyme
Location: 78233 - 79978 (+)
Gene ID: MGYG000002845_3_67
Type: CAZyme
Location: 79989 - 82169 (+)
Gene ID: MGYG000002845_3_68
Type: CAZyme
Location: 82189 - 83661 (+)
Gene ID: MGYG000002845_3_69
Type: TC
Location: 83769 - 84545 (+)
Gene ID: MGYG000002845_3_70
Type: TC
Location: 84555 - 85292 (+)
Gene ID: MGYG000002845_3_71
Type:
Location: 85309 - 85908 (+)
Gene ID: MGYG000002845_3_72
Type: TF
Location: 85929 - 87110 (+)
Gene ID: MGYG000002845_3_73
Type: CAZyme
Location: 87230 - 88429 (+)
Gene ID: MGYG000002845_3_74
Type: TF
Location: 88545 - 89600 (+)
Gene ID: MGYG000002845_3_75
Type: TC
Location: 89719 - 91215 (+)
Gene ID: MGYG000002845_3_76
Type: TC
Location: 91220 - 92170 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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