Cluster: MGYG000002845_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002845
- CGC Family ID: CGCFAM_00074
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002845_3 | MGYG000002845_3_11 | 7896 | 9167 | + | GT4 |
| CAZyme | MGYG000002845_3 | MGYG000002845_3_12 | 9241 | 9954 | + | GT2 |
| NULL(UNKNOWN) | MGYG000002845_3 | MGYG000002845_3_13 | 9911 | 11194 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002845_3 | MGYG000002845_3_14 | 11191 | 11949 | + | ABC2_membrane |
| TC | MGYG000002845_3 | MGYG000002845_3_15 | 11999 | 12772 | + | 3.A.1.103.1 |
| NULL(UNKNOWN) | MGYG000002845_3 | MGYG000002845_3_16 | 12769 | 14793 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002845_3 | MGYG000002845_3_17 | 14823 | 16187 | + | 9.B.18.1.1 |
Gene ID: MGYG000002845_3_11
Type: CAZyme
Location: 7896 - 9167 (+)
Type: CAZyme
Location: 7896 - 9167 (+)
Gene ID: MGYG000002845_3_12
Type: CAZyme
Location: 9241 - 9954 (+)
Type: CAZyme
Location: 9241 - 9954 (+)
Gene ID: MGYG000002845_3_13
Type:
Location: 9911 - 11194 (+)
Type:
Location: 9911 - 11194 (+)
Gene ID: MGYG000002845_3_14
Type: pfam
Location: 11191 - 11949 (+)
Type: pfam
Location: 11191 - 11949 (+)
Gene ID: MGYG000002845_3_15
Type: TC
Location: 11999 - 12772 (+)
Type: TC
Location: 11999 - 12772 (+)
Gene ID: MGYG000002845_3_16
Type:
Location: 12769 - 14793 (+)
Type:
Location: 12769 - 14793 (+)
Gene ID: MGYG000002845_3_17
Type: TC
Location: 14823 - 16187 (+)
Type: TC
Location: 14823 - 16187 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.