Cluster: MGYG000002845_CGC1
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002845
- CGC Family ID: CGCFAM_00199
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002845_2 | MGYG000002845_2_44 | 40261 | 41037 | - | 3.A.1.124.2 |
| TC | MGYG000002845_2 | MGYG000002845_2_45 | 41037 | 41780 | - | 3.A.1.124.2 |
| NULL(UNKNOWN) | MGYG000002845_2 | MGYG000002845_2_46 | 41850 | 43253 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002845_2 | MGYG000002845_2_47 | 43410 | 45242 | - | GH13_4 |
| CAZyme | MGYG000002845_2 | MGYG000002845_2_48 | 45266 | 47446 | - | GH36 |
| TC | MGYG000002845_2 | MGYG000002845_2_49 | 47546 | 48391 | - | 3.A.1.1.28 |
| TC | MGYG000002845_2 | MGYG000002845_2_50 | 48391 | 49257 | - | 3.A.1.1.28 |
| TC | MGYG000002845_2 | MGYG000002845_2_51 | 49276 | 50568 | - | 3.A.1.1.28 |
| TF | MGYG000002845_2 | MGYG000002845_2_52 | 50772 | 51626 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000002845_2 | MGYG000002845_2_53 | 51653 | 53905 | - | GH36 |
Gene ID: MGYG000002845_2_44
Type: TC
Location: 40261 - 41037 (-)
Type: TC
Location: 40261 - 41037 (-)
Gene ID: MGYG000002845_2_45
Type: TC
Location: 41037 - 41780 (-)
Type: TC
Location: 41037 - 41780 (-)
Gene ID: MGYG000002845_2_46
Type:
Location: 41850 - 43253 (-)
Type:
Location: 41850 - 43253 (-)
Gene ID: MGYG000002845_2_47
Type: CAZyme
Location: 43410 - 45242 (-)
Type: CAZyme
Location: 43410 - 45242 (-)
Gene ID: MGYG000002845_2_48
Type: CAZyme
Location: 45266 - 47446 (-)
Type: CAZyme
Location: 45266 - 47446 (-)
Gene ID: MGYG000002845_2_49
Type: TC
Location: 47546 - 48391 (-)
Type: TC
Location: 47546 - 48391 (-)
Gene ID: MGYG000002845_2_50
Type: TC
Location: 48391 - 49257 (-)
Type: TC
Location: 48391 - 49257 (-)
Gene ID: MGYG000002845_2_51
Type: TC
Location: 49276 - 50568 (-)
Type: TC
Location: 49276 - 50568 (-)
Gene ID: MGYG000002845_2_52
Type: TF
Location: 50772 - 51626 (+)
Type: TF
Location: 50772 - 51626 (+)
Gene ID: MGYG000002845_2_53
Type: CAZyme
Location: 51653 - 53905 (-)
Type: CAZyme
Location: 51653 - 53905 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.