Cluster: MGYG000002838_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002838
- CGC Family ID: CGCFAM_00199
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002838_5 | MGYG000002838_5_21 | 22576 | 23877 | + | 3.A.1.1.28 |
| TC | MGYG000002838_5 | MGYG000002838_5_22 | 23883 | 24749 | + | 3.A.1.1.28 |
| TC | MGYG000002838_5 | MGYG000002838_5_23 | 24749 | 25594 | + | 3.A.1.1.28 |
| CAZyme | MGYG000002838_5 | MGYG000002838_5_24 | 25662 | 27842 | + | GH36 |
| CAZyme | MGYG000002838_5 | MGYG000002838_5_25 | 27857 | 29689 | + | GH13_4 |
| CAZyme | MGYG000002838_5 | MGYG000002838_5_26 | 29727 | 31814 | - | GH31_1 |
Gene ID: MGYG000002838_5_21
Type: TC
Location: 22576 - 23877 (+)
Type: TC
Location: 22576 - 23877 (+)
Gene ID: MGYG000002838_5_22
Type: TC
Location: 23883 - 24749 (+)
Type: TC
Location: 23883 - 24749 (+)
Gene ID: MGYG000002838_5_23
Type: TC
Location: 24749 - 25594 (+)
Type: TC
Location: 24749 - 25594 (+)
Gene ID: MGYG000002838_5_24
Type: CAZyme
Location: 25662 - 27842 (+)
Type: CAZyme
Location: 25662 - 27842 (+)
Gene ID: MGYG000002838_5_25
Type: CAZyme
Location: 27857 - 29689 (+)
Type: CAZyme
Location: 27857 - 29689 (+)
Gene ID: MGYG000002838_5_26
Type: CAZyme
Location: 29727 - 31814 (-)
Type: CAZyme
Location: 29727 - 31814 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900541505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.