Cluster: MGYG000002838_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002838
- CGC Family ID: CGCFAM_00011
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002838_4 | MGYG000002838_4_89 | 103778 | 105718 | - | 3.A.1.103.1 |
| TC | MGYG000002838_4 | MGYG000002838_4_90 | 105809 | 106633 | - | 3.A.1.103.4 |
| NULL(UNKNOWN) | MGYG000002838_4 | MGYG000002838_4_91 | 106611 | 108014 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002838_4 | MGYG000002838_4_92 | 107989 | 108789 | - | GT2 |
| CAZyme | MGYG000002838_4 | MGYG000002838_4_93 | 108770 | 109975 | - | GT4 |
| TF | MGYG000002838_4 | MGYG000002838_4_94 | 110210 | 110524 | + | HTH_3 |
| TC | MGYG000002838_4 | MGYG000002838_4_95 | 110660 | 111226 | - | 2.A.107.1.2 |
Gene ID: MGYG000002838_4_89
Type: TC
Location: 103778 - 105718 (-)
Type: TC
Location: 103778 - 105718 (-)
Gene ID: MGYG000002838_4_90
Type: TC
Location: 105809 - 106633 (-)
Type: TC
Location: 105809 - 106633 (-)
Gene ID: MGYG000002838_4_91
Type:
Location: 106611 - 108014 (-)
Type:
Location: 106611 - 108014 (-)
Gene ID: MGYG000002838_4_92
Type: CAZyme
Location: 107989 - 108789 (-)
Type: CAZyme
Location: 107989 - 108789 (-)
Gene ID: MGYG000002838_4_93
Type: CAZyme
Location: 108770 - 109975 (-)
Type: CAZyme
Location: 108770 - 109975 (-)
Gene ID: MGYG000002838_4_94
Type: TF
Location: 110210 - 110524 (+)
Type: TF
Location: 110210 - 110524 (+)
Gene ID: MGYG000002838_4_95
Type: TC
Location: 110660 - 111226 (-)
Type: TC
Location: 110660 - 111226 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900541505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.