Cluster: MGYG000002838_CGC33
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002838
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002838_39 | MGYG000002838_39_14 | 15310 | 16227 | + | 3.A.1.1.7 |
| TC | MGYG000002838_39 | MGYG000002838_39_15 | 16227 | 17060 | + | 3.A.1.1.41 |
| TC | MGYG000002838_39 | MGYG000002838_39_16 | 17111 | 18436 | + | 3.A.1.1.46 |
| CAZyme | MGYG000002838_39 | MGYG000002838_39_17 | 18583 | 21747 | + | GH106 |
| CAZyme | MGYG000002838_39 | MGYG000002838_39_18 | 21756 | 23087 | + | GH28 |
| NULL(UNKNOWN) | MGYG000002838_39 | MGYG000002838_39_19 | 23112 | 23816 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002838_39 | MGYG000002838_39_20 | 23845 | 24654 | - | S6PP | Hydrolase_3 |
| TC | MGYG000002838_39 | MGYG000002838_39_21 | 24657 | 25862 | - | 2.A.23.4.1 |
Gene ID: MGYG000002838_39_14
Type: TC
Location: 15310 - 16227 (+)
Type: TC
Location: 15310 - 16227 (+)
Gene ID: MGYG000002838_39_15
Type: TC
Location: 16227 - 17060 (+)
Type: TC
Location: 16227 - 17060 (+)
Gene ID: MGYG000002838_39_16
Type: TC
Location: 17111 - 18436 (+)
Type: TC
Location: 17111 - 18436 (+)
Gene ID: MGYG000002838_39_17
Type: CAZyme
Location: 18583 - 21747 (+)
Type: CAZyme
Location: 18583 - 21747 (+)
Gene ID: MGYG000002838_39_18
Type: CAZyme
Location: 21756 - 23087 (+)
Type: CAZyme
Location: 21756 - 23087 (+)
Gene ID: MGYG000002838_39_19
Type:
Location: 23112 - 23816 (+)
Type:
Location: 23112 - 23816 (+)
Gene ID: MGYG000002838_39_20
Type: pfam
Location: 23845 - 24654 (-)
Type: pfam
Location: 23845 - 24654 (-)
Gene ID: MGYG000002838_39_21
Type: TC
Location: 24657 - 25862 (-)
Type: TC
Location: 24657 - 25862 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900541505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.