Cluster: MGYG000002838_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002838
- CGC Family ID: CGCFAM_00163
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002838_33 | MGYG000002838_33_26 | 24884 | 25711 | + | CE4 |
| TC | MGYG000002838_33 | MGYG000002838_33_27 | 25669 | 27066 | - | 2.A.66.1.33 |
| TC | MGYG000002838_33 | MGYG000002838_33_28 | 27310 | 28503 | - | 2.A.23.2.2 |
| TC | MGYG000002838_33 | MGYG000002838_33_29 | 28759 | 30126 | + | 2.A.66.1.28 |
| pfam | MGYG000002838_33 | MGYG000002838_33_30 | 30187 | 31293 | + | DUF362 |
| TC | MGYG000002838_33 | MGYG000002838_33_31 | 31462 | 32844 | - | 2.A.25.1.3 |
Gene ID: MGYG000002838_33_26
Type: CAZyme
Location: 24884 - 25711 (+)
Type: CAZyme
Location: 24884 - 25711 (+)
Gene ID: MGYG000002838_33_27
Type: TC
Location: 25669 - 27066 (-)
Type: TC
Location: 25669 - 27066 (-)
Gene ID: MGYG000002838_33_28
Type: TC
Location: 27310 - 28503 (-)
Type: TC
Location: 27310 - 28503 (-)
Gene ID: MGYG000002838_33_29
Type: TC
Location: 28759 - 30126 (+)
Type: TC
Location: 28759 - 30126 (+)
Gene ID: MGYG000002838_33_30
Type: pfam
Location: 30187 - 31293 (+)
Type: pfam
Location: 30187 - 31293 (+)
Gene ID: MGYG000002838_33_31
Type: TC
Location: 31462 - 32844 (-)
Type: TC
Location: 31462 - 32844 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900541505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.