Cluster: MGYG000002838_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002838
- CGC Family ID: CGCFAM_03402
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002838_31 | MGYG000002838_31_17 | 20219 | 21709 | + | 3.A.1.2.20 |
| TC | MGYG000002838_31 | MGYG000002838_31_18 | 21726 | 22718 | + | 3.A.1.2.9 |
| TC | MGYG000002838_31 | MGYG000002838_31_19 | 22721 | 23731 | + | 3.A.1.2.16 |
| TC | MGYG000002838_31 | MGYG000002838_31_20 | 23804 | 24859 | + | 3.A.1.2.9 |
| pfam | MGYG000002838_31 | MGYG000002838_31_21 | 24999 | 25313 | + | rhaM |
| CAZyme | MGYG000002838_31 | MGYG000002838_31_22 | 25629 | 26441 | + | GH73 |
Gene ID: MGYG000002838_31_17
Type: TC
Location: 20219 - 21709 (+)
Type: TC
Location: 20219 - 21709 (+)
Gene ID: MGYG000002838_31_18
Type: TC
Location: 21726 - 22718 (+)
Type: TC
Location: 21726 - 22718 (+)
Gene ID: MGYG000002838_31_19
Type: TC
Location: 22721 - 23731 (+)
Type: TC
Location: 22721 - 23731 (+)
Gene ID: MGYG000002838_31_20
Type: TC
Location: 23804 - 24859 (+)
Type: TC
Location: 23804 - 24859 (+)
Gene ID: MGYG000002838_31_21
Type: pfam
Location: 24999 - 25313 (+)
Type: pfam
Location: 24999 - 25313 (+)
Gene ID: MGYG000002838_31_22
Type: CAZyme
Location: 25629 - 26441 (+)
Type: CAZyme
Location: 25629 - 26441 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900541505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.