Cluster: MGYG000002838_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002838
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002838_20 | MGYG000002838_20_53 | 51341 | 52414 | - | GH109 |
| TF | MGYG000002838_20 | MGYG000002838_20_54 | 52646 | 53359 | + | 0038753 |
| pfam | MGYG000002838_20 | MGYG000002838_20_55 | 53396 | 54451 | + | Bmp |
| TC | MGYG000002838_20 | MGYG000002838_20_56 | 54472 | 55986 | + | 3.A.1.2.12 |
| TC | MGYG000002838_20 | MGYG000002838_20_57 | 55976 | 57019 | + | 3.A.1.2.12 |
| TC | MGYG000002838_20 | MGYG000002838_20_58 | 57016 | 57912 | + | 3.A.1.2.18 |
Gene ID: MGYG000002838_20_53
Type: CAZyme
Location: 51341 - 52414 (-)
Type: CAZyme
Location: 51341 - 52414 (-)
Gene ID: MGYG000002838_20_54
Type: TF
Location: 52646 - 53359 (+)
Type: TF
Location: 52646 - 53359 (+)
Gene ID: MGYG000002838_20_55
Type: pfam
Location: 53396 - 54451 (+)
Type: pfam
Location: 53396 - 54451 (+)
Gene ID: MGYG000002838_20_56
Type: TC
Location: 54472 - 55986 (+)
Type: TC
Location: 54472 - 55986 (+)
Gene ID: MGYG000002838_20_57
Type: TC
Location: 55976 - 57019 (+)
Type: TC
Location: 55976 - 57019 (+)
Gene ID: MGYG000002838_20_58
Type: TC
Location: 57016 - 57912 (+)
Type: TC
Location: 57016 - 57912 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900541505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.