Cluster: MGYG000002838_CGC23
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002838
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002838_16 | MGYG000002838_16_47 | 53323 | 55188 | + | 1.A.33.1.4 |
| sulfatase | MGYG000002838_16 | MGYG000002838_16_48 | 55280 | 56476 | + | S1_7 |
| CAZyme | MGYG000002838_16 | MGYG000002838_16_49 | 56624 | 58729 | - | GH13_11 |
| TF | MGYG000002838_16 | MGYG000002838_16_50 | 58736 | 59365 | - | GerE |
| STP | MGYG000002838_16 | MGYG000002838_16_51 | 59362 | 60534 | - | HATPase_c |
| TC | MGYG000002838_16 | MGYG000002838_16_52 | 60824 | 61756 | + | 3.A.1.105.9 |
| pfam | MGYG000002838_16 | MGYG000002838_16_53 | 61829 | 63025 | + | ABC2_membrane_3 |
| pfam | MGYG000002838_16 | MGYG000002838_16_54 | 63012 | 64157 | + | ABC2_membrane | ABC2_membrane_3 |
| TC | MGYG000002838_16 | MGYG000002838_16_55 | 64433 | 65263 | + | 3.A.1.132.3 |
Gene ID: MGYG000002838_16_47
Type: TC
Location: 53323 - 55188 (+)
Type: TC
Location: 53323 - 55188 (+)
Gene ID: MGYG000002838_16_48
Type: sulfatase
Location: 55280 - 56476 (+)
Type: sulfatase
Location: 55280 - 56476 (+)
Gene ID: MGYG000002838_16_49
Type: CAZyme
Location: 56624 - 58729 (-)
Type: CAZyme
Location: 56624 - 58729 (-)
Gene ID: MGYG000002838_16_50
Type: TF
Location: 58736 - 59365 (-)
Type: TF
Location: 58736 - 59365 (-)
Gene ID: MGYG000002838_16_51
Type: STP
Location: 59362 - 60534 (-)
Type: STP
Location: 59362 - 60534 (-)
Gene ID: MGYG000002838_16_52
Type: TC
Location: 60824 - 61756 (+)
Type: TC
Location: 60824 - 61756 (+)
Gene ID: MGYG000002838_16_53
Type: pfam
Location: 61829 - 63025 (+)
Type: pfam
Location: 61829 - 63025 (+)
Gene ID: MGYG000002838_16_54
Type: pfam
Location: 63012 - 64157 (+)
Type: pfam
Location: 63012 - 64157 (+)
Gene ID: MGYG000002838_16_55
Type: TC
Location: 64433 - 65263 (+)
Type: TC
Location: 64433 - 65263 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900541505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.