Cluster: MGYG000002838_CGC21
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002838
- CGC Family ID: CGCFAM_00684
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002838_12 | MGYG000002838_12_34 | 39670 | 40671 | - | GH109 |
| CAZyme | MGYG000002838_12 | MGYG000002838_12_35 | 40723 | 41829 | - | GT4 |
| pfam | MGYG000002838_12 | MGYG000002838_12_36 | 41885 | 42469 | - | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | MGYG000002838_12 | MGYG000002838_12_37 | 42469 | 43542 | - | GH177 |
| pfam | MGYG000002838_12 | MGYG000002838_12_38 | 43549 | 44631 | - | Epimerase_2 |
| pfam | MGYG000002838_12 | MGYG000002838_12_39 | 44662 | 45975 | - | UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | MGYG000002838_12 | MGYG000002838_12_40 | 46017 | 47264 | - | GT4 |
| TC | MGYG000002838_12 | MGYG000002838_12_41 | 47288 | 47968 | - | 9.B.18.1.3 |
| pfam | MGYG000002838_12 | MGYG000002838_12_42 | 48066 | 49268 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| TC | MGYG000002838_12 | MGYG000002838_12_43 | 49273 | 51213 | - | 9.B.18.2.1 |
| pfam | MGYG000002838_12 | MGYG000002838_12_44 | 51407 | 52945 | - | LytR_cpsA_psr |
| pfam | MGYG000002838_12 | MGYG000002838_12_45 | 53034 | 53954 | - | NTP_transferase |
| TC | MGYG000002838_12 | MGYG000002838_12_46 | 53997 | 54272 | - | 8.A.8.1.6 |
Gene ID: MGYG000002838_12_34
Type: CAZyme
Location: 39670 - 40671 (-)
Type: CAZyme
Location: 39670 - 40671 (-)
Gene ID: MGYG000002838_12_35
Type: CAZyme
Location: 40723 - 41829 (-)
Type: CAZyme
Location: 40723 - 41829 (-)
Gene ID: MGYG000002838_12_36
Type: pfam
Location: 41885 - 42469 (-)
Type: pfam
Location: 41885 - 42469 (-)
Gene ID: MGYG000002838_12_37
Type: CAZyme
Location: 42469 - 43542 (-)
Type: CAZyme
Location: 42469 - 43542 (-)
Gene ID: MGYG000002838_12_38
Type: pfam
Location: 43549 - 44631 (-)
Type: pfam
Location: 43549 - 44631 (-)
Gene ID: MGYG000002838_12_39
Type: pfam
Location: 44662 - 45975 (-)
Type: pfam
Location: 44662 - 45975 (-)
Gene ID: MGYG000002838_12_40
Type: CAZyme
Location: 46017 - 47264 (-)
Type: CAZyme
Location: 46017 - 47264 (-)
Gene ID: MGYG000002838_12_41
Type: TC
Location: 47288 - 47968 (-)
Type: TC
Location: 47288 - 47968 (-)
Gene ID: MGYG000002838_12_42
Type: pfam
Location: 48066 - 49268 (-)
Type: pfam
Location: 48066 - 49268 (-)
Gene ID: MGYG000002838_12_43
Type: TC
Location: 49273 - 51213 (-)
Type: TC
Location: 49273 - 51213 (-)
Gene ID: MGYG000002838_12_44
Type: pfam
Location: 51407 - 52945 (-)
Type: pfam
Location: 51407 - 52945 (-)
Gene ID: MGYG000002838_12_45
Type: pfam
Location: 53034 - 53954 (-)
Type: pfam
Location: 53034 - 53954 (-)
Gene ID: MGYG000002838_12_46
Type: TC
Location: 53997 - 54272 (-)
Type: TC
Location: 53997 - 54272 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900541505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.