Cluster: MGYG000002838_CGC1
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002838
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002838_1 | MGYG000002838_1_101 | 103383 | 104648 | - | GT4 |
| pfam | MGYG000002838_1 | MGYG000002838_1_102 | 104650 | 105171 | - | VTT_dom |
| STP | MGYG000002838_1 | MGYG000002838_1_103 | 105365 | 105958 | - | Pribosyltran |
| TC | MGYG000002838_1 | MGYG000002838_1_104 | 105972 | 106598 | - | 9.B.28.1.3 |
| TF | MGYG000002838_1 | MGYG000002838_1_105 | 106981 | 107646 | - | 0038753 |
| STP | MGYG000002838_1 | MGYG000002838_1_106 | 107801 | 108556 | + | Fer4 | Fer4 |
| TC | MGYG000002838_1 | MGYG000002838_1_107 | 108695 | 110062 | + | 2.A.66.1.33 |
| TC | MGYG000002838_1 | MGYG000002838_1_108 | 109980 | 110705 | - | 2.A.115.2.9 |
| TF | MGYG000002838_1 | MGYG000002838_1_109 | 110789 | 112189 | - | GntR |
| TC | MGYG000002838_1 | MGYG000002838_1_110 | 112453 | 113205 | + | 2.A.78.1.1 |
| TC | MGYG000002838_1 | MGYG000002838_1_111 | 113202 | 113528 | + | 2.A.78.1.1 |
| pfam | MGYG000002838_1 | MGYG000002838_1_112 | 113804 | 114256 | - | HSP20 |
| NULL(UNKNOWN) | MGYG000002838_1 | MGYG000002838_1_113 | 114514 | 116409 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002838_1 | MGYG000002838_1_114 | 116414 | 118444 | - | GT2 |
| CAZyme | MGYG000002838_1 | MGYG000002838_1_115 | 118453 | 119532 | - | GT2 |
| TC | MGYG000002838_1 | MGYG000002838_1_116 | 119529 | 121235 | - | 9.B.34.1.4 |
| STP | MGYG000002838_1 | MGYG000002838_1_117 | 121238 | 122089 | - | EAL |
| CAZyme | MGYG000002838_1 | MGYG000002838_1_118 | 122267 | 123709 | - | GH32 |
| TC | MGYG000002838_1 | MGYG000002838_1_119 | 123784 | 125784 | - | 4.A.1.2.1 |
Gene ID: MGYG000002838_1_101
Type: CAZyme
Location: 103383 - 104648 (-)
Type: CAZyme
Location: 103383 - 104648 (-)
Gene ID: MGYG000002838_1_102
Type: pfam
Location: 104650 - 105171 (-)
Type: pfam
Location: 104650 - 105171 (-)
Gene ID: MGYG000002838_1_103
Type: STP
Location: 105365 - 105958 (-)
Type: STP
Location: 105365 - 105958 (-)
Gene ID: MGYG000002838_1_104
Type: TC
Location: 105972 - 106598 (-)
Type: TC
Location: 105972 - 106598 (-)
Gene ID: MGYG000002838_1_105
Type: TF
Location: 106981 - 107646 (-)
Type: TF
Location: 106981 - 107646 (-)
Gene ID: MGYG000002838_1_106
Type: STP
Location: 107801 - 108556 (+)
Type: STP
Location: 107801 - 108556 (+)
Gene ID: MGYG000002838_1_107
Type: TC
Location: 108695 - 110062 (+)
Type: TC
Location: 108695 - 110062 (+)
Gene ID: MGYG000002838_1_108
Type: TC
Location: 109980 - 110705 (-)
Type: TC
Location: 109980 - 110705 (-)
Gene ID: MGYG000002838_1_109
Type: TF
Location: 110789 - 112189 (-)
Type: TF
Location: 110789 - 112189 (-)
Gene ID: MGYG000002838_1_110
Type: TC
Location: 112453 - 113205 (+)
Type: TC
Location: 112453 - 113205 (+)
Gene ID: MGYG000002838_1_111
Type: TC
Location: 113202 - 113528 (+)
Type: TC
Location: 113202 - 113528 (+)
Gene ID: MGYG000002838_1_112
Type: pfam
Location: 113804 - 114256 (-)
Type: pfam
Location: 113804 - 114256 (-)
Gene ID: MGYG000002838_1_113
Type:
Location: 114514 - 116409 (-)
Type:
Location: 114514 - 116409 (-)
Gene ID: MGYG000002838_1_114
Type: CAZyme
Location: 116414 - 118444 (-)
Type: CAZyme
Location: 116414 - 118444 (-)
Gene ID: MGYG000002838_1_115
Type: CAZyme
Location: 118453 - 119532 (-)
Type: CAZyme
Location: 118453 - 119532 (-)
Gene ID: MGYG000002838_1_116
Type: TC
Location: 119529 - 121235 (-)
Type: TC
Location: 119529 - 121235 (-)
Gene ID: MGYG000002838_1_117
Type: STP
Location: 121238 - 122089 (-)
Type: STP
Location: 121238 - 122089 (-)
Gene ID: MGYG000002838_1_118
Type: CAZyme
Location: 122267 - 123709 (-)
Type: CAZyme
Location: 122267 - 123709 (-)
Gene ID: MGYG000002838_1_119
Type: TC
Location: 123784 - 125784 (-)
Type: TC
Location: 123784 - 125784 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900541505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.