Cluster: MGYG000002836_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002836
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002836_2 | MGYG000002836_2_17 | 17064 | 17948 | + | 3.A.1.1.42 |
| TC | MGYG000002836_2 | MGYG000002836_2_18 | 17952 | 18788 | + | 3.A.1.1.41 |
| CAZyme | MGYG000002836_2 | MGYG000002836_2_19 | 18797 | 20905 | + | GH3 |
| STP | MGYG000002836_2 | MGYG000002836_2_20 | 21064 | 22794 | + | dCache_1 |
| TF | MGYG000002836_2 | MGYG000002836_2_21 | 22806 | 23546 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000002836_2 | MGYG000002836_2_22 | 23941 | 25479 | + | 9.A.11.1.2 |
Gene ID: MGYG000002836_2_17
Type: TC
Location: 17064 - 17948 (+)
Type: TC
Location: 17064 - 17948 (+)
Gene ID: MGYG000002836_2_18
Type: TC
Location: 17952 - 18788 (+)
Type: TC
Location: 17952 - 18788 (+)
Gene ID: MGYG000002836_2_19
Type: CAZyme
Location: 18797 - 20905 (+)
Type: CAZyme
Location: 18797 - 20905 (+)
Gene ID: MGYG000002836_2_20
Type: STP
Location: 21064 - 22794 (+)
Type: STP
Location: 21064 - 22794 (+)
Gene ID: MGYG000002836_2_21
Type: TF
Location: 22806 - 23546 (+)
Type: TF
Location: 22806 - 23546 (+)
Gene ID: MGYG000002836_2_22
Type: TC
Location: 23941 - 25479 (+)
Type: TC
Location: 23941 - 25479 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.