Cluster: MGYG000002836_CGC67
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_05508
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002836_50 | MGYG000002836_50_1 | 246 | 896 | + | 9.B.28.1.8 |
| CAZyme | MGYG000002836_50 | MGYG000002836_50_2 | 953 | 3256 | + | CBM48 | GH13_9 |
| TC | MGYG000002836_50 | MGYG000002836_50_3 | 3293 | 4171 | + | 1.A.23.2.2 |
| pfam | MGYG000002836_50 | MGYG000002836_50_4 | 4473 | 6578 | + | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| pfam | MGYG000002836_50 | MGYG000002836_50_5 | 6753 | 7496 | + | PseudoU_synth_1 | PseudoU_synth_1 | DUF2344 |
| TC | MGYG000002836_50 | MGYG000002836_50_6 | 7753 | 8871 | + | 8.A.59.4.1 |
Gene ID: MGYG000002836_50_1
Type: TC
Location: 246 - 896 (+)
Type: TC
Location: 246 - 896 (+)
Gene ID: MGYG000002836_50_2
Type: CAZyme
Location: 953 - 3256 (+)
Type: CAZyme
Location: 953 - 3256 (+)
Gene ID: MGYG000002836_50_3
Type: TC
Location: 3293 - 4171 (+)
Type: TC
Location: 3293 - 4171 (+)
Gene ID: MGYG000002836_50_4
Type: pfam
Location: 4473 - 6578 (+)
Type: pfam
Location: 4473 - 6578 (+)
Gene ID: MGYG000002836_50_5
Type: pfam
Location: 6753 - 7496 (+)
Type: pfam
Location: 6753 - 7496 (+)
Gene ID: MGYG000002836_50_6
Type: TC
Location: 7753 - 8871 (+)
Type: TC
Location: 7753 - 8871 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.