Cluster: MGYG000002836_CGC65
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_00039
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002836_47 | MGYG000002836_47_2 | 2141 | 3580 | + | 9.B.18.1.1 |
| pfam | MGYG000002836_47 | MGYG000002836_47_3 | 3798 | 4826 | + | LytR_cpsA_psr |
| NULL(UNKNOWN) | MGYG000002836_47 | MGYG000002836_47_4 | 5033 | 5275 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002836_47 | MGYG000002836_47_5 | 5345 | 6637 | - | 2.A.1.31.3 |
| pfam | MGYG000002836_47 | MGYG000002836_47_6 | 6789 | 7997 | - | Glyphos_transf |
| CAZyme | MGYG000002836_47 | MGYG000002836_47_7 | 8013 | 9182 | - | GT4 |
Gene ID: MGYG000002836_47_2
Type: TC
Location: 2141 - 3580 (+)
Type: TC
Location: 2141 - 3580 (+)
Gene ID: MGYG000002836_47_3
Type: pfam
Location: 3798 - 4826 (+)
Type: pfam
Location: 3798 - 4826 (+)
Gene ID: MGYG000002836_47_4
Type:
Location: 5033 - 5275 (-)
Type:
Location: 5033 - 5275 (-)
Gene ID: MGYG000002836_47_5
Type: TC
Location: 5345 - 6637 (-)
Type: TC
Location: 5345 - 6637 (-)
Gene ID: MGYG000002836_47_6
Type: pfam
Location: 6789 - 7997 (-)
Type: pfam
Location: 6789 - 7997 (-)
Gene ID: MGYG000002836_47_7
Type: CAZyme
Location: 8013 - 9182 (-)
Type: CAZyme
Location: 8013 - 9182 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.