Cluster: MGYG000002836_CGC64
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_00855
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_41 | MGYG000002836_41_7 | 7319 | 8758 | - | CBM50 |
| pfam | MGYG000002836_41 | MGYG000002836_41_8 | 9125 | 9697 | + | DUF1256 |
| NULL(UNKNOWN) | MGYG000002836_41 | MGYG000002836_41_9 | 9813 | 10907 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002836_41 | MGYG000002836_41_10 | 11081 | 12046 | - | 3.A.1.2.23 |
| TC | MGYG000002836_41 | MGYG000002836_41_11 | 12073 | 13032 | - | 3.A.1.2.15 |
| TC | MGYG000002836_41 | MGYG000002836_41_12 | 13045 | 14538 | - | 3.A.1.2.20 |
Gene ID: MGYG000002836_41_7
Type: CAZyme
Location: 7319 - 8758 (-)
Type: CAZyme
Location: 7319 - 8758 (-)
Gene ID: MGYG000002836_41_8
Type: pfam
Location: 9125 - 9697 (+)
Type: pfam
Location: 9125 - 9697 (+)
Gene ID: MGYG000002836_41_9
Type:
Location: 9813 - 10907 (-)
Type:
Location: 9813 - 10907 (-)
Gene ID: MGYG000002836_41_10
Type: TC
Location: 11081 - 12046 (-)
Type: TC
Location: 11081 - 12046 (-)
Gene ID: MGYG000002836_41_11
Type: TC
Location: 12073 - 13032 (-)
Type: TC
Location: 12073 - 13032 (-)
Gene ID: MGYG000002836_41_12
Type: TC
Location: 13045 - 14538 (-)
Type: TC
Location: 13045 - 14538 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.