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Cluster: MGYG000002836_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002836_33 MGYG000002836_33_22 13886 14632 - 3.A.1.149.1
TF MGYG000002836_33 MGYG000002836_33_23 14629 15165 - HTH_3 | SpoVT_AbrB
TF MGYG000002836_33 MGYG000002836_33_24 15689 16555 + HTH_AraC
CAZyme MGYG000002836_33 MGYG000002836_33_25 17190 18512 - GH4
TF MGYG000002836_33 MGYG000002836_33_26 18689 19552 + HTH_AraC | HTH_AraC
TC MGYG000002836_33 MGYG000002836_33_27 19608 20708 - 9.A.28.1.1
CAZyme MGYG000002836_33 MGYG000002836_33_28 20865 22616 - GH36
NULL(UNKNOWN) MGYG000002836_33 MGYG000002836_33_29 22618 23898 - NULL(UNKNOWN)
[View Structural Homologs]
TF MGYG000002836_33 MGYG000002836_33_30 23977 24903 + HTH_AraC | HTH_AraC
TC MGYG000002836_33 MGYG000002836_33_31 24998 25897 - 3.A.1.1.29
TC MGYG000002836_33 MGYG000002836_33_32 25909 26835 - 3.A.1.1.29
Gene ID: MGYG000002836_33_22
Type: TC
Location: 13886 - 14632 (-)
Gene ID: MGYG000002836_33_23
Type: TF
Location: 14629 - 15165 (-)
Gene ID: MGYG000002836_33_24
Type: TF
Location: 15689 - 16555 (+)
Gene ID: MGYG000002836_33_25
Type: CAZyme
Location: 17190 - 18512 (-)
Gene ID: MGYG000002836_33_26
Type: TF
Location: 18689 - 19552 (+)
Gene ID: MGYG000002836_33_27
Type: TC
Location: 19608 - 20708 (-)
Gene ID: MGYG000002836_33_28
Type: CAZyme
Location: 20865 - 22616 (-)
Gene ID: MGYG000002836_33_29
Type:
Location: 22618 - 23898 (-)
Gene ID: MGYG000002836_33_30
Type: TF
Location: 23977 - 24903 (+)
Gene ID: MGYG000002836_33_31
Type: TC
Location: 24998 - 25897 (-)
Gene ID: MGYG000002836_33_32
Type: TC
Location: 25909 - 26835 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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