Cluster: MGYG000002836_CGC58
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002836
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002836_32 | MGYG000002836_32_23 | 20769 | 22904 | + | 1.B.52.2.2 |
| CAZyme | MGYG000002836_32 | MGYG000002836_32_24 | 23000 | 25018 | + | GH154 |
| TF | MGYG000002836_32 | MGYG000002836_32_25 | 25224 | 26876 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000002836_32 | MGYG000002836_32_26 | 26886 | 28670 | - | 8.A.59.2.1 |
| TC | MGYG000002836_32 | MGYG000002836_32_27 | 29246 | 30571 | + | 3.A.1.1.44 |
| TC | MGYG000002836_32 | MGYG000002836_32_28 | 30696 | 31589 | + | 3.A.1.1.11 |
| TC | MGYG000002836_32 | MGYG000002836_32_29 | 31604 | 32431 | + | 3.A.1.1.34 |
| CAZyme | MGYG000002836_32 | MGYG000002836_32_30 | 32484 | 33662 | + | GH88 |
| sulfatase | MGYG000002836_32 | MGYG000002836_32_31 | 33675 | 35060 | + | S1_27 |
| CAZyme | MGYG000002836_32 | MGYG000002836_32_32 | 35122 | 40737 | + | PL8 | PL8 |
Gene ID: MGYG000002836_32_23
Type: TC
Location: 20769 - 22904 (+)
Type: TC
Location: 20769 - 22904 (+)
Gene ID: MGYG000002836_32_24
Type: CAZyme
Location: 23000 - 25018 (+)
Type: CAZyme
Location: 23000 - 25018 (+)
Gene ID: MGYG000002836_32_25
Type: TF
Location: 25224 - 26876 (-)
Type: TF
Location: 25224 - 26876 (-)
Gene ID: MGYG000002836_32_26
Type: TC
Location: 26886 - 28670 (-)
Type: TC
Location: 26886 - 28670 (-)
Gene ID: MGYG000002836_32_27
Type: TC
Location: 29246 - 30571 (+)
Type: TC
Location: 29246 - 30571 (+)
Gene ID: MGYG000002836_32_28
Type: TC
Location: 30696 - 31589 (+)
Type: TC
Location: 30696 - 31589 (+)
Gene ID: MGYG000002836_32_29
Type: TC
Location: 31604 - 32431 (+)
Type: TC
Location: 31604 - 32431 (+)
Gene ID: MGYG000002836_32_30
Type: CAZyme
Location: 32484 - 33662 (+)
Type: CAZyme
Location: 32484 - 33662 (+)
Gene ID: MGYG000002836_32_31
Type: sulfatase
Location: 33675 - 35060 (+)
Type: sulfatase
Location: 33675 - 35060 (+)
Gene ID: MGYG000002836_32_32
Type: CAZyme
Location: 35122 - 40737 (+)
Type: CAZyme
Location: 35122 - 40737 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.