Cluster: MGYG000002836_CGC53
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002836
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002836_27 | MGYG000002836_27_1 | 400 | 1377 | + | 3.A.1.5.9 |
| TC | MGYG000002836_27 | MGYG000002836_27_2 | 1697 | 2581 | + | 3.A.1.5.9 |
| TC | MGYG000002836_27 | MGYG000002836_27_3 | 2652 | 3665 | + | 3.A.1.5.13 |
| TC | MGYG000002836_27 | MGYG000002836_27_4 | 3656 | 4660 | + | 3.A.1.5.29 |
| NULL(UNKNOWN) | MGYG000002836_27 | MGYG000002836_27_5 | 4612 | 4863 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002836_27 | MGYG000002836_27_6 | 5075 | 5776 | + | CE14 |
| TC | MGYG000002836_27 | MGYG000002836_27_7 | 5810 | 7720 | + | 3.A.1.5.14 |
Gene ID: MGYG000002836_27_1
Type: TC
Location: 400 - 1377 (+)
Type: TC
Location: 400 - 1377 (+)
Gene ID: MGYG000002836_27_2
Type: TC
Location: 1697 - 2581 (+)
Type: TC
Location: 1697 - 2581 (+)
Gene ID: MGYG000002836_27_3
Type: TC
Location: 2652 - 3665 (+)
Type: TC
Location: 2652 - 3665 (+)
Gene ID: MGYG000002836_27_4
Type: TC
Location: 3656 - 4660 (+)
Type: TC
Location: 3656 - 4660 (+)
Gene ID: MGYG000002836_27_5
Type:
Location: 4612 - 4863 (+)
Type:
Location: 4612 - 4863 (+)
Gene ID: MGYG000002836_27_6
Type: CAZyme
Location: 5075 - 5776 (+)
Type: CAZyme
Location: 5075 - 5776 (+)
Gene ID: MGYG000002836_27_7
Type: TC
Location: 5810 - 7720 (+)
Type: TC
Location: 5810 - 7720 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.