Cluster: MGYG000002836_CGC52
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002836
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_26 | MGYG000002836_26_38 | 46378 | 48582 | - | GH3 |
| TF | MGYG000002836_26 | MGYG000002836_26_39 | 48626 | 49660 | - | LacI |
| STP | MGYG000002836_26 | MGYG000002836_26_40 | 49835 | 51400 | - | SBP_bac_1 |
| TC | MGYG000002836_26 | MGYG000002836_26_41 | 51498 | 52409 | - | 3.A.1.1.29 |
| TC | MGYG000002836_26 | MGYG000002836_26_42 | 52426 | 53418 | - | 3.A.1.1.10 |
| CAZyme | MGYG000002836_26 | MGYG000002836_26_43 | 53690 | 57031 | + | GH94 |
Gene ID: MGYG000002836_26_38
Type: CAZyme
Location: 46378 - 48582 (-)
Type: CAZyme
Location: 46378 - 48582 (-)
Gene ID: MGYG000002836_26_39
Type: TF
Location: 48626 - 49660 (-)
Type: TF
Location: 48626 - 49660 (-)
Gene ID: MGYG000002836_26_40
Type: STP
Location: 49835 - 51400 (-)
Type: STP
Location: 49835 - 51400 (-)
Gene ID: MGYG000002836_26_41
Type: TC
Location: 51498 - 52409 (-)
Type: TC
Location: 51498 - 52409 (-)
Gene ID: MGYG000002836_26_42
Type: TC
Location: 52426 - 53418 (-)
Type: TC
Location: 52426 - 53418 (-)
Gene ID: MGYG000002836_26_43
Type: CAZyme
Location: 53690 - 57031 (+)
Type: CAZyme
Location: 53690 - 57031 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.