Cluster: MGYG000002836_CGC51
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_01853
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_26 | MGYG000002836_26_10 | 10502 | 12049 | - | GH28 |
| CAZyme | MGYG000002836_26 | MGYG000002836_26_11 | 12158 | 13249 | - | GH105 |
| TC | MGYG000002836_26 | MGYG000002836_26_12 | 13390 | 15123 | - | 3.A.1.106.2 |
| CAZyme | MGYG000002836_26 | MGYG000002836_26_13 | 15138 | 17066 | - | CBM91 | GH43_12 |
| CAZyme | MGYG000002836_26 | MGYG000002836_26_14 | 17174 | 18784 | - | CBM91 | GH43_10 |
| CAZyme | MGYG000002836_26 | MGYG000002836_26_15 | 18800 | 19510 | - | CE12 |
| TC | MGYG000002836_26 | MGYG000002836_26_16 | 19571 | 20425 | - | 3.A.1.1.29 |
| TC | MGYG000002836_26 | MGYG000002836_26_17 | 20435 | 21388 | - | 3.A.1.1.10 |
| TC | MGYG000002836_26 | MGYG000002836_26_18 | 21484 | 23058 | - | 3.A.1.1.9 |
| peptidase | MGYG000002836_26 | MGYG000002836_26_19 | 23282 | 24244 | - | S12.UPW |
| TF | MGYG000002836_26 | MGYG000002836_26_20 | 24261 | 26498 | - | HTH_AraC |
| CAZyme | MGYG000002836_26 | MGYG000002836_26_21 | 26514 | 27512 | - | CE8 |
Gene ID: MGYG000002836_26_10
Type: CAZyme
Location: 10502 - 12049 (-)
Type: CAZyme
Location: 10502 - 12049 (-)
Gene ID: MGYG000002836_26_11
Type: CAZyme
Location: 12158 - 13249 (-)
Type: CAZyme
Location: 12158 - 13249 (-)
Gene ID: MGYG000002836_26_12
Type: TC
Location: 13390 - 15123 (-)
Type: TC
Location: 13390 - 15123 (-)
Gene ID: MGYG000002836_26_13
Type: CAZyme
Location: 15138 - 17066 (-)
Type: CAZyme
Location: 15138 - 17066 (-)
Gene ID: MGYG000002836_26_14
Type: CAZyme
Location: 17174 - 18784 (-)
Type: CAZyme
Location: 17174 - 18784 (-)
Gene ID: MGYG000002836_26_15
Type: CAZyme
Location: 18800 - 19510 (-)
Type: CAZyme
Location: 18800 - 19510 (-)
Gene ID: MGYG000002836_26_16
Type: TC
Location: 19571 - 20425 (-)
Type: TC
Location: 19571 - 20425 (-)
Gene ID: MGYG000002836_26_17
Type: TC
Location: 20435 - 21388 (-)
Type: TC
Location: 20435 - 21388 (-)
Gene ID: MGYG000002836_26_18
Type: TC
Location: 21484 - 23058 (-)
Type: TC
Location: 21484 - 23058 (-)
Gene ID: MGYG000002836_26_19
Type: peptidase
Location: 23282 - 24244 (-)
Type: peptidase
Location: 23282 - 24244 (-)
Gene ID: MGYG000002836_26_20
Type: TF
Location: 24261 - 26498 (-)
Type: TF
Location: 24261 - 26498 (-)
Gene ID: MGYG000002836_26_21
Type: CAZyme
Location: 26514 - 27512 (-)
Type: CAZyme
Location: 26514 - 27512 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.