Cluster: MGYG000002836_CGC46
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_00022
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_22 | MGYG000002836_22_25 | 25812 | 26474 | + | CE14 |
| TC | MGYG000002836_22 | MGYG000002836_22_26 | 26647 | 27273 | + | 9.B.18.1.2 |
| pfam | MGYG000002836_22 | MGYG000002836_22_27 | 27315 | 28013 | + | WbqC |
| NULL(UNKNOWN) | MGYG000002836_22 | MGYG000002836_22_28 | 28003 | 28980 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002836_22 | MGYG000002836_22_29 | 28985 | 30244 | + | GT4 |
Gene ID: MGYG000002836_22_25
Type: CAZyme
Location: 25812 - 26474 (+)
Type: CAZyme
Location: 25812 - 26474 (+)
Gene ID: MGYG000002836_22_26
Type: TC
Location: 26647 - 27273 (+)
Type: TC
Location: 26647 - 27273 (+)
Gene ID: MGYG000002836_22_27
Type: pfam
Location: 27315 - 28013 (+)
Type: pfam
Location: 27315 - 28013 (+)
Gene ID: MGYG000002836_22_28
Type:
Location: 28003 - 28980 (+)
Type:
Location: 28003 - 28980 (+)
Gene ID: MGYG000002836_22_29
Type: CAZyme
Location: 28985 - 30244 (+)
Type: CAZyme
Location: 28985 - 30244 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.