Cluster: MGYG000002836_CGC45
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002836
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002836_21 | MGYG000002836_21_58 | 62206 | 62775 | - | 2.A.88.5.1 |
| TF | MGYG000002836_21 | MGYG000002836_21_59 | 63620 | 66271 | + | MerR |
| pfam | MGYG000002836_21 | MGYG000002836_21_60 | 66564 | 66977 | + | SnoaL | SnoaL_2 |
| CAZyme | MGYG000002836_21 | MGYG000002836_21_61 | 67385 | 68560 | + | GT28 |
| CAZyme | MGYG000002836_21 | MGYG000002836_21_62 | 68532 | 69128 | + | CE4 |
| TC | MGYG000002836_21 | MGYG000002836_21_63 | 69121 | 70188 | + | 4.D.2.1.5 |
Gene ID: MGYG000002836_21_58
Type: TC
Location: 62206 - 62775 (-)
Type: TC
Location: 62206 - 62775 (-)
Gene ID: MGYG000002836_21_59
Type: TF
Location: 63620 - 66271 (+)
Type: TF
Location: 63620 - 66271 (+)
Gene ID: MGYG000002836_21_60
Type: pfam
Location: 66564 - 66977 (+)
Type: pfam
Location: 66564 - 66977 (+)
Gene ID: MGYG000002836_21_61
Type: CAZyme
Location: 67385 - 68560 (+)
Type: CAZyme
Location: 67385 - 68560 (+)
Gene ID: MGYG000002836_21_62
Type: CAZyme
Location: 68532 - 69128 (+)
Type: CAZyme
Location: 68532 - 69128 (+)
Gene ID: MGYG000002836_21_63
Type: TC
Location: 69121 - 70188 (+)
Type: TC
Location: 69121 - 70188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.