Cluster: MGYG000002836_CGC44
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002836
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_19 | MGYG000002836_19_46 | 55708 | 58698 | + | GT2 |
| STP | MGYG000002836_19 | MGYG000002836_19_47 | 58700 | 60943 | + | Fer4 |
| TC | MGYG000002836_19 | MGYG000002836_19_48 | 61190 | 61966 | + | 3.A.1.103.5 |
| TC | MGYG000002836_19 | MGYG000002836_19_49 | 62029 | 62766 | + | 3.A.1.103.5 |
| pfam | MGYG000002836_19 | MGYG000002836_19_50 | 62857 | 64707 | - | Wzy_C |
| TC | MGYG000002836_19 | MGYG000002836_19_51 | 64925 | 65509 | + | 9.B.18.1.1 |
| pfam | MGYG000002836_19 | MGYG000002836_19_52 | 65506 | 66297 | + | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 |
| CAZyme | MGYG000002836_19 | MGYG000002836_19_53 | 66341 | 67450 | + | GT4 |
| pfam | MGYG000002836_19 | MGYG000002836_19_54 | 67518 | 68570 | + | Acyl_transf_3 |
| CAZyme | MGYG000002836_19 | MGYG000002836_19_55 | 69131 | 70279 | + | GT4 |
| TC | MGYG000002836_19 | MGYG000002836_19_56 | 70334 | 71110 | + | 3.A.1.103.4 |
| TC | MGYG000002836_19 | MGYG000002836_19_57 | 71110 | 72378 | + | 3.A.1.103.4 |
| pfam | MGYG000002836_19 | MGYG000002836_19_58 | 72390 | 73931 | + | TehB | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 | DUF4214 |
| CAZyme | MGYG000002836_19 | MGYG000002836_19_59 | 73931 | 75022 | + | GT4 |
| CAZyme | MGYG000002836_19 | MGYG000002836_19_60 | 75019 | 76062 | + | GT4 |
| pfam | MGYG000002836_19 | MGYG000002836_19_61 | 76073 | 77227 | + | Glycos_transf_1 | Glyco_trans_1_4 |
| pfam | MGYG000002836_19 | MGYG000002836_19_62 | 77950 | 80025 | + | DUF6311 |
| CAZyme | MGYG000002836_19 | MGYG000002836_19_63 | 80079 | 81029 | + | GT2 |
Gene ID: MGYG000002836_19_46
Type: CAZyme
Location: 55708 - 58698 (+)
Type: CAZyme
Location: 55708 - 58698 (+)
Gene ID: MGYG000002836_19_47
Type: STP
Location: 58700 - 60943 (+)
Type: STP
Location: 58700 - 60943 (+)
Gene ID: MGYG000002836_19_48
Type: TC
Location: 61190 - 61966 (+)
Type: TC
Location: 61190 - 61966 (+)
Gene ID: MGYG000002836_19_49
Type: TC
Location: 62029 - 62766 (+)
Type: TC
Location: 62029 - 62766 (+)
Gene ID: MGYG000002836_19_50
Type: pfam
Location: 62857 - 64707 (-)
Type: pfam
Location: 62857 - 64707 (-)
Gene ID: MGYG000002836_19_51
Type: TC
Location: 64925 - 65509 (+)
Type: TC
Location: 64925 - 65509 (+)
Gene ID: MGYG000002836_19_52
Type: pfam
Location: 65506 - 66297 (+)
Type: pfam
Location: 65506 - 66297 (+)
Gene ID: MGYG000002836_19_53
Type: CAZyme
Location: 66341 - 67450 (+)
Type: CAZyme
Location: 66341 - 67450 (+)
Gene ID: MGYG000002836_19_54
Type: pfam
Location: 67518 - 68570 (+)
Type: pfam
Location: 67518 - 68570 (+)
Gene ID: MGYG000002836_19_55
Type: CAZyme
Location: 69131 - 70279 (+)
Type: CAZyme
Location: 69131 - 70279 (+)
Gene ID: MGYG000002836_19_56
Type: TC
Location: 70334 - 71110 (+)
Type: TC
Location: 70334 - 71110 (+)
Gene ID: MGYG000002836_19_57
Type: TC
Location: 71110 - 72378 (+)
Type: TC
Location: 71110 - 72378 (+)
Gene ID: MGYG000002836_19_58
Type: pfam
Location: 72390 - 73931 (+)
Type: pfam
Location: 72390 - 73931 (+)
Gene ID: MGYG000002836_19_59
Type: CAZyme
Location: 73931 - 75022 (+)
Type: CAZyme
Location: 73931 - 75022 (+)
Gene ID: MGYG000002836_19_60
Type: CAZyme
Location: 75019 - 76062 (+)
Type: CAZyme
Location: 75019 - 76062 (+)
Gene ID: MGYG000002836_19_61
Type: pfam
Location: 76073 - 77227 (+)
Type: pfam
Location: 76073 - 77227 (+)
Gene ID: MGYG000002836_19_62
Type: pfam
Location: 77950 - 80025 (+)
Type: pfam
Location: 77950 - 80025 (+)
Gene ID: MGYG000002836_19_63
Type: CAZyme
Location: 80079 - 81029 (+)
Type: CAZyme
Location: 80079 - 81029 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.